CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009492_P001	Maize	mitochondrion, plasma membrane	35.51	86.91
Zm00001d026706_P005	Maize	plasma membrane	88.26	79.2
HORVU2Hr1G124860.3	Barley	nucleus, peroxisome, plastid	60.03	72.92
TraesCS2A01G574700.1	Wheat	plasma membrane	68.35	70.77
TraesCS2D01G585300.1	Wheat	plasma membrane	70.58	70.47
TraesCS2B01G612200.1	Wheat	plasma membrane	70.58	70.37
GSMUA_Achr8P32630_001	Banana	cytosol, peroxisome, plasma membrane	48.74	63.2
GSMUA_Achr9P00310_001	Banana	cytosol	46.06	59.96
CDX89610	Canola	cytosol, peroxisome, plasma membrane	49.78	55.37
CDX93119	Canola	cytosol, peroxisome, plasma membrane	49.33	54.88
VIT_07s0031g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	51.41	54.49
KRH53911	Soybean	cytosol, peroxisome, plasma membrane	49.93	54.19
Bra013141.1-P	Field mustard	cytosol, peroxisome, plasma membrane	50.37	53.64
KRH59586	Soybean	cytosol, peroxisome, plasma membrane	51.71	53.62
KRH40938	Soybean	cytosol, peroxisome, plasma membrane	51.71	53.21
KRH64027	Soybean	extracellular	50.52	53.12
AT2G13610.1	Thale cress	cytosol, peroxisome, plasma membrane	50.22	52.08
Solyc05g056470.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.1	51.63
PGSC0003DMT400059944	Potato	cytosol, peroxisome, plasma membrane	47.7	50.08
EES03276	Sorghum	mitochondrion	43.09	47.39
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	37.89	40.35
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	37.59	36.25
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	34.03	32.07
EES17614	Sorghum	cytosol, peroxisome, vacuole	33.73	31.97
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	32.24	29.13
KXG27901	Sorghum	plasma membrane, plastid	27.93	28.97
EES03493	Sorghum	cytosol, peroxisome, plasma membrane	30.16	27.73
OQU76682	Sorghum	mitochondrion, plasma membrane	23.48	26.55
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	30.76	26.0
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	24.52	24.81
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	24.07	24.43
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	23.92	24.28
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	22.59	22.89
EES13415	Sorghum	plastid	25.26	22.7
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	29.12	22.35
EER92832	Sorghum	plasma membrane	24.67	21.76

Protein Annotations

MapMan:24.1.3.2.2	Gene3D:3.40.50.300	EntrezGene:8078669	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	UniProt:C5XET7	EnsemblPlants:EES01897	ProteinID:EES01897	ProteinID:EES01897.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF230
SMART:SM00382	EnsemblPlantsGene:SORBI_3003G387300	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001A85038	RefSeq:XP_002456777.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:69901473..69908905

Molecular Weight (calculated)

72505.1 Da

IEP (calculated)

9.009

GRAVY (calculated)

0.255

Length

673 amino acids

Sequence
(BLAST)

001: MPKNSCAGGC EIQASGINYR IAVSTRPHPP LKVWSRSDDD VHVQDHQDHH HHSVRHVLRD VSCRARPGEL FAIVGPSGAG KSTLLEILAG RLSPSPQPDL
101: LLLLDGAAAH SADLRRVSGY VTQQDVLFPL LTVRETLLFS ARLRLGAARL PAKDMDARAD ALLDDLTLRR VAATRIKDLS GGERRRVSIG VEAVHDPPVL
201: ILDEPTSGLD SASALQIVGA LRAMAETRGR TVLLSIHQPG ARIVKMFDSV LLLAAGSVLH QGTVDQLRAL LGDAGLHLPP HVDAVEFAID SVDALRLHHR
301: HAGLQAPPPQ PQPQPSGRCT LQHLFQLHSK QVADEDTAAV VPMVASAATG SSRYANSRAR EVAVLSQRFF KNVARTRQLF ACRTVCMLVA GLALGSIFYD
401: LGEDKVAERV GLFAFLLTFL LSSTTEALPI FLQERDILAK ETSSGAYRVS SYALANAVVF LPFQLALAVV FAAPVYWLAG LRRTAAAFSY FLLVIWLILY
501: TANSVVVCFA AAAPDFVVGN AAIQGVMGSF FLFSGYFIAR SAMPACWVFM HYLSLFKWPF EALLVNEFAG GGRCVVRALG ECVATGDEVL RREGLGEECR
601: WRNVGVMVAF MAAYRVLGYV VLRVRCSLAL NKGAVAAGPP GLGLSRRLRS QLAIIGAAAW PSPSSSSSST PPP

Best Arabidopsis Sequence Match ( AT2G13610.1 )
(BLAST)

001: MEKQGCEIEA LDIDYNIFVR KINVNPFGIF RRKPRPEADQ PVKTEEESLK LEDETGNKVK HVLKGVTCRA KPWEILAIVG PSGAGKSSLL EILAARLIPQ
101: TGSVYVNKRP VDRANFKKIS GYVTQKDTLF PLLTVEETLL FSAKLRLKLP ADELRSRVKS LVHELGLEAV ATARVGDDSV RGISGGERRR VSIGVEVIHD
201: PKVLILDEPT SGLDSTSALL IIDMLKHMAE TRGRTIILTI HQPGFRIVKQ FNSVLLLANG STLKQGSVDQ LGVYLRSNGL HPPLHENIVE FAIESIESIT
301: KQQRLQESRR AAHVLTPQTT LQEKRSEDSQ GESKSGKFTL QQLFQQTRVA DVGTMNIATE FTRDFANSRL EETMILTHRF SKNIFRTKEL FACRTVQMLG
401: SGIVLGLIFH NLKDDLKGAR ERVGLFAFIL TFLLTSTIEA LPIFLQEREI LMKETSSGSY RVSSYAVANG LVYLPFLLIL AILFSTPVYW LVGLNPSFMA
501: FLHFSLLIWL ILYTANSVVV CFSALVPNFI VGNSVISGVM GSFFLFSGYF ISNHEIPGYW IFMHYISLFK YPFEGFLINE FSKSNKCLEY GFGKCLVTEE
601: DLLKEERYGE ESRWRNVVIM LCFVLLYRFI SYVILRCRCS QRSFKTTLA

Arabidopsis Description

ABCG5ABC transporter G family member 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT6]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.