CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043722_P001	Maize	cytosol, peroxisome, plasma membrane	95.36	94.58
TraesCS3B01G285600.1	Wheat	cytosol, peroxisome, plasma membrane	84.43	86.55
TraesCS3A01G253700.1	Wheat	cytosol, peroxisome, plasma membrane	84.7	85.99
TraesCS3D01G254600.1	Wheat	cytosol, peroxisome, plasma membrane	84.43	85.71
Os07t0191600-04	Rice	nucleus, peroxisome, plasma membrane	77.87	82.13
GSMUA_Achr4P27670_001	Banana	cytosol, peroxisome, plasma membrane	60.11	69.29
KRH74446	Soybean	cytosol, peroxisome, plasma membrane	60.93	66.47
KRH39507	Soybean	cytosol	65.98	66.16
PGSC0003DMT400084876	Potato	cytosol	62.57	62.83
Solyc09g098410.1.1	Tomato	nucleus	62.57	62.83
HORVU3Hr1G066220.1	Barley	plastid	52.19	47.93
OQU80214	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	48.22	40.25
EES17614	Sorghum	cytosol, peroxisome, vacuole	37.02	38.17
EES18923	Sorghum	cytosol, peroxisome, plasma membrane	36.61	37.53
EES01718	Sorghum	cytosol, peroxisome, plasma membrane, plastid	36.61	35.97
EES03276	Sorghum	mitochondrion	28.83	34.48
EER95064	Sorghum	cytosol, peroxisome, plasma membrane	36.75	33.79
EES14035	Sorghum	cytosol, peroxisome, plasma membrane	27.6	31.96
EES01897	Sorghum	cytosol, plasma membrane, plastid	27.73	30.16
KXG21900	Sorghum	cytosol, peroxisome, plasma membrane	27.6	28.94
OQU76682	Sorghum	mitochondrion, plasma membrane	21.58	26.55
KXG20331	Sorghum	cytosol, peroxisome, plasma membrane	22.95	25.26
OQU76684	Sorghum	nucleus, peroxisome, plasma membrane	22.68	25.04
OQU76683	Sorghum	nucleus, peroxisome, plasma membrane	22.54	24.89
KXG27901	Sorghum	plasma membrane, plastid	21.58	24.35
EER92832	Sorghum	plasma membrane	24.04	23.07
EES00402	Sorghum	endoplasmic reticulum, golgi, plasma membrane	20.08	22.14
EES13415	Sorghum	plastid	22.13	21.63

Protein Annotations

MapMan:26.9.4.1	Gene3D:3.40.50.300	EntrezGene:8069762	InterPro:AAA+_ATPase	InterPro:ABC_2_trans	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	UniProt:C5XHL7	EnsemblPlants:EES03493	ProteinID:EES03493	ProteinID:EES03493.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF01061	ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR19241	PANTHER:PTHR19241:SF180
SMART:SM00382	EnsemblPlantsGene:SORBI_3003G271300	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0001A84C0B	RefSeq:XP_002458373.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:60786059..60789489

Molecular Weight (calculated)

80742.6 Da

IEP (calculated)

9.254

GRAVY (calculated)

0.012

Length

732 amino acids

Sequence
(BLAST)

001: MAHHNHHQHN GRHGGGHRLE TVINMAPPPP EKPAGVGRFG FTGGLEFTSL TYTVVKKQRG AGGEWEKKDV DLLHEITGYA PKGCVTAVMG PSGAGKSTFL
101: DALAGRIASL DGRVALDGVE MSPSLIKRSS AYVMQDDRLF PMLTVYETLM FAADFRLGSS VSASDKKLRV ENLIEQLGLT SSRNTYIGDE GTRGVSGGER
201: RRVSIGVDII HGPALLFLDE PTSGLDSTSA HSVIEKVHDI ACAGSTVVLT IHQPSSRILL LLDHLIILAR GQLMYSGGPK EVTAHLGRMG RKVPKGENSI
301: ENLLDVIQEY EQSEFGVKAL AEFCLTGLKP PKLTATYGPE GLSTVSSIVQ TPISGPGGGD DDDFDRSLRS QHSKSPWSGV RLTPSRRPKH KGPGAPHDNH
401: RYTPEIVMGT PTPMSSAYTV NEDDYLTPTH RAAGPNATGA PGMGVNALGH RGKFANSYVV EVWVLMRRNF TNIWRTPELF LSRLMVLTVM GFLMATMFTK
501: PKDNTQGITN RLSFFIFTVC VFFFSSNDAV PAFIQERFIF IRETSHNAYR ASAYVVAGII TYLPFLLLQS ATYAAIVWFA LRLHGQFLYF LVMLYAALLS
601: TNSFVVFISS VVPNFILGYA AVIAFTALFF LFCGYFLDSH SIPVAWKWMN TISTMKYPYE GLLMNEFNGG HVFASERAIG LTLTGNDILK QLGISTEEDR
701: KWWMVLYLLG WAVFYRVLFY LVLRFASKNK RK

Best Arabidopsis Sequence Match ( AT2G39350.1 )
(BLAST)

001: MARIVAANDD DSMELNTISS IHDSTLGQLL KNVSDVRKMA IGDETPVHES LNQDYNDGYM RTVPFVLSFD NLTYNVSVRP KLDFRNLFPR RRTEDPEIAQ
101: TARPKTKTLL NNISGETRDG EIMAVLGASG SGKSTLIDAL ANRIAKGSLK GTVKLNGETL QSRMLKVISA YVMQDDLLFP MLTVEETLMF AAEFRLPRSL
201: PKSKKKLRVQ ALIDQLGIRN AAKTIIGDEG HRGISGGERR RVSIGIDIIH DPILLFLDEP TSGLDSTSAF MVVKVLKRIA QSGSIVIMSI HQPSHRVLGL
301: LDRLIFLSRG HTVYSGSPAS LPRFFTEFGS PIPENENRTE FALDLIRELE GSAGGTRGLI EFNKKWQEMK KQSNRQPPLT PPSSPYPNLT LKEAIAASIS
401: RGKLVSGGES VAHGGATTNT TTLAVPAFAN PMWIEIKTLS KRSMLNSRRQ PELFGIRIAS VVITGFILAT VFWRLDNSPK GVQERLGFFA FAMSTMFYTC
501: ADALPVFLQE RYIFMRETAY NAYRRSSYVL SHAIVSFPSL IFLSVAFAAT TYWAVGLDGG LTGLLFYCLI ILASFWSGSS FVTFLSGVVP SVMLGYTIVV
601: AILAYFLLFS GFFINRNRIP DYWIWFHYMS LVKYPYEAVL QNEFSDATKC FVRGVQIFDN TPLGELPEVM KLKLLGTVSK SLGVTISSTT CLTTGSDILR
701: QQGVVQLSKW NCLFITVAFG FFFRILFYFT LLLGSKNKRR

Arabidopsis Description

ABCG1ABC transporter G family member 1 [Source:UniProtKB/Swiss-Prot;Acc:O80946]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.