Factsheet for Bra019347.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001174.1-P
Bra001423.1-P
Bra001773.1-P
Bra004677.1-P
Bra005063.1-P
Bra005728.1-P
Bra007220.1-P
Bra007982.1-P
Bra007983.1-P
Bra009581.1-P
Bra011947.1-P
Bra013534.1-P
Bra013838.1-P
Bra015512.1-P
Bra016143.1-P
Bra018081.1-P
Bra022520.1-P
Bra025616.1-P
Bra026274.1-P
Bra028703.1-P
Bra028905.1-P
Bra032414.1-P
Bra033769.1-P
Bra034807.1-P
Bra035820.1-P
Bra038252.1-P
Bra038682.1-P
Bra039034.1-P
Bra040242.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22910.1	Bra015512.1-P	AT1G06590.1	20706207
AT4G22910.1	Bra032414.1-P	AT1G06590.1	20706207
AT4G22910.1	Bra007982.1-P	AT1G71380.1	20706207
AT4G22910.1	Bra007983.1-P	AT1G71380.1	20706207
AT4G22910.1	Bra016143.1-P	AT1G71380.1	20706207
AT4G22910.1	Bra025616.1-P	AT2G04660.1	20706207
AT4G22910.1	Bra028905.1-P	AT2G04660.1	20706207
AT4G22910.1	Bra039034.1-P	AT2G20000.1	17944809
AT4G22910.1	Bra039034.1-P	AT2G20000.1	20706207
AT4G22910.1	Bra011947.1-P	AT2G28450.1	20706207
AT4G22910.1	Bra005063.1-P	AT2G39090.1	20706207
AT4G22910.1	Bra004677.1-P	AT2G42260.1	21798944
AT4G22910.1	Bra001423.1-P	AT3G11830.1	20706207
AT4G22910.1	Bra034807.1-P	AT3G11830.1	20706207
AT4G22910.1	Bra038682.1-P	AT3G11830.1	20706207
AT4G22910.1	Bra001773.1-P	AT3G20050.1	20706207
AT4G22910.1	Bra035820.1-P	AT3G20050.1	20706207
AT4G22910.1	Bra038252.1-P	AT3G20050.1	20706207
AT4G22910.1	Bra018081.1-P	AT3G48150.1	20706207
AT4G22910.1	Bra033769.1-P	AT3G48150.1	20706207
AT4G22910.1	Bra007220.1-P	AT3G56150.1	20706207
AT4G22910.1	Bra022520.1-P	AT3G56150.1	20706207
AT4G22910.1	Bra013534.1-P	AT4G21530.1	20706207
AT4G22910.1	Bra013838.1-P	AT4G24820.1	20706207
AT4G22910.1	Bra026274.1-P	AT4G28230.1	20706207
AT4G22910.1	Bra005728.1-P	AT5G02530.1	20706207
AT4G22910.1	Bra009581.1-P	AT5G02530.1	20706207
AT4G22910.1	Bra028703.1-P	AT5G07310.1	20706207
AT4G22910.1	Bra001174.1-P	AT5G26360.1	20706207
AT4G22910.1	Bra040242.1-P	AT5G26360.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94136	Canola	nucleus, plastid	77.45	95.29
CDY71640	Canola	nucleus, plastid	47.66	93.33
Bra013655.1-P	Field mustard	nucleus, plastid	92.98	92.78
AT4G22910.1	Thale cress	nucleus, plastid	91.06	88.61
Bra000756.1-P	Field mustard	nucleus	77.45	77.45
Bra029426.1-P	Field mustard	nucleus	78.09	77.26
PGSC0003DMT400058525	Potato	nucleus, plastid	74.68	73.43
Solyc08g080080.2.1	Tomato	nucleus, plastid	74.68	72.97
GSMUA_Achr11P...	Banana	plastid	74.26	71.81
Solyc12g056490.1.1	Tomato	nucleus, plastid	72.13	70.48
PGSC0003DMT400027994	Potato	nucleus, plastid	72.13	69.75
Zm00001d027430_P001	Maize	plastid	72.77	66.54
Zm00001d048472_P001	Maize	nucleus, plastid	72.98	65.96
GSMUA_Achr11P...	Banana	plastid	67.23	64.36
TraesCS4B01G346200.2	Wheat	nucleus, plastid	70.21	64.33
TraesCS4D01G341200.1	Wheat	nucleus, plastid	70.0	64.26
Os03t0123300-01	Rice	plastid	70.21	63.1
TraesCS1B01G166800.1	Wheat	cytosol	54.89	60.99
TraesCS7B01G353500.1	Wheat	plastid	52.13	60.49
Bra006219.1-P	Field mustard	plastid	60.85	58.85
HORVU4Hr1G084710.1	Barley	cytosol, mitochondrion	70.0	58.44
OQU93351	Sorghum	nucleus	72.98	49.28
Bra008327.1-P	Field mustard	cytosol, mitochondrion	37.66	41.36
Bra005544.1-P	Field mustard	nucleus	37.45	40.09
Bra034555.1-P	Field mustard	nucleus	31.49	39.05
Bra037011.1-P	Field mustard	nucleus	34.26	38.42
Bra011430.1-P	Field mustard	cytosol	38.3	25.17

Protein Annotations

MapMan:13.3.4.1.3	Gene3D:2.130.10.10	InterPro:Apc4_WD40_dom	EnsemblPlantsGene:Bra019347	EnsemblPlants:Bra019347.1	EnsemblPlants:Bra019347.1-P
InterPro:Cdc20/Fizzy	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234	GO:GO:0097027
GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M4DS54	PFAM:PF00400
PFAM:PF12894	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF31
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002540E0C	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT4G22910 (E=2e-233) FZR2 | FZR2 (FIZZY-RELATED 2); signal transducer

Coordinates

chrA03:+:24771636..24774264

Molecular Weight (calculated)

51432.1 Da

IEP (calculated)

8.754

GRAVY (calculated)

-0.413

Length

470 amino acids

Sequence
(BLAST)

001: MEDPTASNAT PPANSSPHLS PPPSMSTPII SLESRINRLI NANQSPSPSR SIYSDRFIPS RSGSNYALFD LAKDGKEDGA GSYATLLRAA MFGPETPEKR
101: DITGFSTSRN IFRFKTETNR CSDSFSPFVS DDGPGVSQSP IKALRKVSRS PYKVLDAPAL QDDFYLNLVD WSAQNVLAVG LGNCVYLWNA SSSKVTTLCD
201: LGADDSVCSV GWNFRGTHLA VGTSNGKVQI WDASRCKRTR TMEGHRLRVG ALAWSSSVLS SGSRDKSILQ RDIRCEEDHV SKLTGHKSEV CGLKWSYDNR
301: ELASGGNDNR LFVWNQHSTQ PVLKYSEHTA AVKAIAWSPH VHGLLASGGG TADRCIRFWN TTTNAHLSSI DTGSQVCNLA WSKNVNELVS THGYSQNQII
401: VWKYPTMSKV ATLTGHTYRV LYLAVSPDGQ TIVTGAGDET LRFWNVFPSP KSQNTDSEIG STFFGRTTIR

Best Arabidopsis Sequence Match ( AT4G22910.1 )
(BLAST)

001: MEEEDPTASN VITNSNSSSM RNLSPAMNTP VVSLESRINR LINANQSQSP SPSSLSRSIY SDRFIPSRSG SNFALFDLSP SPSKDGKEDG AGSYATLLRA
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR

Arabidopsis Description

FZR2FZR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.