Factsheet for Bra001773.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82264	Canola	cytosol	99.82	100.0
CDY36063	Canola	cytosol	99.63	99.82
AT3G20050.1	Thale cress	cytosol	96.34	96.51
Bra035820.1-P	Field mustard	cytosol	96.89	95.14
VIT_15s0021g02230.t01	Wine grape	cytosol	88.64	88.64
KRH59103	Soybean	nucleus	88.1	88.26
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	87.91	88.07
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	85.9	86.06
GSMUA_Achr11P...	Banana	cytosol	86.81	85.87
Solyc01g090750.2.1	Tomato	nucleus	85.35	85.5
PGSC0003DMT400066954	Potato	cytosol	85.35	85.5
Zm00001d052056_P005	Maize	plasma membrane	84.62	84.77
Zm00001d018349_P001	Maize	cytosol	84.25	84.4
EES05938	Sorghum	cytosol	84.07	84.22
TraesCS1D01G208500.1	Wheat	cytosol	76.74	84.14
TraesCS1A01G205200.1	Wheat	cytosol	83.7	83.85
HORVU1Hr1G052730.26	Barley	cytosol	59.52	83.76
TraesCS7B01G124100.1	Wheat	cytosol, golgi, unclear	83.52	83.67
TraesCS7A01G217200.1	Wheat	cytosol	83.15	83.3
TraesCS4A01G427500.1	Wheat	cytosol, unclear	82.78	82.94
TraesCS7A01G062100.1	Wheat	cytosol	82.78	82.94
TraesCS7D01G056800.1	Wheat	cytosol	82.78	82.94
TraesCS1B01G218800.1	Wheat	cytosol	71.61	82.84
TraesCS7D01G218500.2	Wheat	cytosol	83.33	79.68
GSMUA_Achr2P01090_001	Banana	cytosol	50.37	76.18
HORVU7Hr1G044070.2	Barley	cytosol	79.12	75.66
Bra038252.1-P	Field mustard	cytosol	97.07	69.65
Bra020134.1-P	Field mustard	cytosol	32.97	35.5
Bra002337.1-P	Field mustard	cytosol	33.7	34.91
Bra034807.1-P	Field mustard	cytosol	33.52	34.46
Bra021300.1-P	Field mustard	cytosol	32.78	33.71
Bra022292.1-P	Field mustard	cytosol, plastid	32.78	33.58
Bra038682.1-P	Field mustard	cytosol	33.88	33.33
Bra001423.1-P	Field mustard	cytosol	34.07	33.21
Bra012506.1-P	Field mustard	cytosol	31.14	31.78
Bra010965.1-P	Field mustard	cytosol	30.77	31.4
Bra032797.1-P	Field mustard	cytosol	30.77	31.4
Bra001174.1-P	Field mustard	cytosol	29.49	29.01
Bra040242.1-P	Field mustard	cytosol	28.94	28.47
Bra036422.1-P	Field mustard	cytosol	27.66	27.76
Bra001094.1-P	Field mustard	cytosol	27.84	27.74
Bra031959.1-P	Field mustard	cytosol	27.47	27.57
Bra040591.1-P	Field mustard	cytosol	26.37	26.92
Bra008652.1-P	Field mustard	cytosol	26.01	26.49
Bra035423.1-P	Field mustard	cytosol	10.81	26.34
Bra006338.1-P	Field mustard	cytosol	21.43	25.77
Bra006584.1-P	Field mustard	cytosol	33.52	24.47

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10	EnsemblPlantsGene:Bra001773	EnsemblPlants:Bra001773.1
EnsemblPlants:Bra001773.1-P	InterPro:Chap_CCT_alpha	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4CC43
PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353
PANTHER:PTHR11353:SF177	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02340
UniParc:UPI0002540567	SEG:seg	:	:	:	:

Description

AT3G20050 (E=4e-290) ATTCP-1 | ATTCP-1; ATP binding / protein binding / unfolded protein binding

Coordinates

chrA03:-:18365964..18369426

Molecular Weight (calculated)

59252.9 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.056

Length

546 amino acids

Sequence
(BLAST)

001: MSISAQNPDI SGDRQSGQDV RTQNVVACQA ISNIVKTSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIVA
101: AELLKRANDL VRNKIHPTSI ISGYRLAMRE ACKYIDEKLV TKVEKLGRVP LINCAKTSMS SKLISGDSDF FANLVVDAVL SVKMTNQRGE IKYPIKGINI
201: LKAHGQSARD SYLLKGYALN TGRAAQGMPL RVSPAKIACL DFNLQKTKMQ LGVQVVVNDP RELEKIRQRQ EADMTKERIE KLLKAGANVI LTTKGIDDMA
301: LKYFVEAGAI AVRRVRKDDM RHVAKATGAT LVTTFADMEG EETFDPAHLG SADEVVEERI ADDDVVLIKG TKTSSAVSLI LRGANDYMLD EMERALHDSL
401: CIVKRTLESN AVVAGGGAVE SALSVYLEHL ATTLGSREQL AIAEFAEALL VIPKVLAVNA AKDATELVAK LRAYHHTAQT KADKKHYSSM GLDLVNGIVR
501: NNLEAGVIEP AMSKVKIIQF ATEAAITILR IDDMIKLVKE DGQGDE

Best Arabidopsis Sequence Match ( AT3G20050.1 )
(BLAST)

001: MSISAQNPDI SGDRQSGQDV RTQNVMACQA VSNIVKTSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIVA
101: AELLKRANDL VRNKIHPTSI ISGYRLAMRE SCKYIEEKLV TKVEKLGKVP LINCAKTSMS SKLISGDSDF FANLVVEAVL SVKMTNQRGE IKYPIKGINI
201: LKAHGQSARD SYLLNGYALN TGRAAQGMPL RVSPAKIACL DFNLQKTKMQ LGVQVVVNDP RELEKIRQRE ADMTKERIEK LLKAGANVIL TTKGIDDMAL
301: KYFVEAGAIA VRRVRKEDMR HVAKATGATL VTTFADMEGE ETFDPAHLGS ADEVVEERIA DDDVILIKGT KTSSAVSLIL RGANDYMLDE MERALHDALC
401: IVKRTLESNT VVAGGGAVES ALSVYLEHLA TTLGSREQLA IAEFADALLI IPKVLAVNAA KDATELVAKL RAYHHTAQTK ADKKHYSSMG LDLVNGTIRN
501: NLEAGVIEPA MSKVKIIQFA TEAAITILRI DDMIKLVKDE SQGEE

Arabidopsis Description

CCT1T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P28769]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.