Factsheet for Bra038252.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42227	Canola	cytosol	71.62	100.0
AT3G20050.1	Thale cress	cytosol	70.3	98.17
Bra001773.1-P	Field mustard	cytosol	69.65	97.07
Bra035820.1-P	Field mustard	cytosol	70.7	96.76
KRH59103	Soybean	nucleus	64.13	89.54
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	63.99	89.36
VIT_15s0021g02230.t01	Wine grape	cytosol	63.86	89.01
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	62.29	86.97
GSMUA_Achr11P...	Banana	cytosol	62.68	86.41
Zm00001d052056_P005	Maize	plasma membrane	61.63	86.06
PGSC0003DMT400066954	Potato	cytosol	61.37	85.69
Solyc01g090750.2.1	Tomato	nucleus	61.37	85.69
Zm00001d018349_P001	Maize	cytosol	61.24	85.5
EES05938	Sorghum	cytosol	61.24	85.5
TraesCS7B01G124100.1	Wheat	cytosol, golgi, unclear	60.97	85.14
TraesCS7A01G217200.1	Wheat	cytosol	60.71	84.77
TraesCS7D01G056800.1	Wheat	cytosol	60.58	84.59
TraesCS7A01G062100.1	Wheat	cytosol	60.58	84.59
TraesCS4A01G427500.1	Wheat	cytosol, unclear	60.58	84.59
TraesCS1D01G208500.1	Wheat	cytosol	55.32	84.54
TraesCS1A01G205200.1	Wheat	cytosol	60.45	84.4
TraesCS1B01G218800.1	Wheat	cytosol	52.04	83.9
HORVU1Hr1G052730.26	Barley	cytosol	42.71	83.76
TraesCS7D01G218500.2	Wheat	cytosol	60.84	81.09
GSMUA_Achr2P01090_001	Banana	cytosol	36.66	77.29
HORVU7Hr1G044070.2	Barley	cytosol	57.56	76.71
Bra020134.1-P	Field mustard	cytosol	23.52	35.31
Bra034807.1-P	Field mustard	cytosol	24.57	35.22
Bra002337.1-P	Field mustard	cytosol	24.05	34.72
Bra038682.1-P	Field mustard	cytosol	25.23	34.59
Bra001423.1-P	Field mustard	cytosol	25.36	34.46
Bra021300.1-P	Field mustard	cytosol	23.39	33.52
Bra022292.1-P	Field mustard	cytosol, plastid	23.26	33.21
Bra012506.1-P	Field mustard	cytosol	22.34	31.78
Bra010965.1-P	Field mustard	cytosol	22.08	31.4
Bra032797.1-P	Field mustard	cytosol	22.08	31.4
Bra001174.1-P	Field mustard	cytosol	21.55	29.55
Bra040242.1-P	Field mustard	cytosol	21.29	29.19
Bra036422.1-P	Field mustard	cytosol	19.71	27.57
Bra001094.1-P	Field mustard	cytosol	19.84	27.55
Bra031959.1-P	Field mustard	cytosol	19.58	27.39
Bra035423.1-P	Field mustard	cytosol	7.88	26.79
Bra040591.1-P	Field mustard	cytosol	18.79	26.73
Bra008652.1-P	Field mustard	cytosol	18.79	26.68
Bra006338.1-P	Field mustard	cytosol	15.24	25.55
Bra006584.1-P	Field mustard	cytosol	24.18	24.6

Protein Annotations

Gene3D:1.10.560.10	Gene3D:2.70.160.11	MapMan:20.3.1.1	Gene3D:3.30.260.10	Gene3D:3.40.50.150	Gene3D:3.50.7.10
EnsemblPlantsGene:Bra038252	EnsemblPlants:Bra038252.1	EnsemblPlants:Bra038252.1-P	InterPro:Chap_CCT_alpha	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410
InterPro:IPR027413	UniProt:M4FAY6	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751
ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF177	InterPro:SAM-dependent_MTases	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF53335	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02340	UniParc:UPI0002544903	SEG:seg

Description

AT3G20050 (E=8e-300) ATTCP-1 | ATTCP-1; ATP binding / protein binding / unfolded protein binding

Coordinates

chrA01:+:21290098..21297175

Molecular Weight (calculated)

83488.8 Da

IEP (calculated)

5.667

GRAVY (calculated)

-0.114

Length

761 amino acids

Sequence
(BLAST)

001: MSISAQNPDI SGERQSGQDV RTQNVMACQA VSNIVKTSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIVA
101: AELLKRANDL VRNKIHPTSI ISGYRLAMRE ACKYIEEKLV TKVEKLGKVP LINCAKTSMS SKLISGDSDF FANLVVDAVL SVKMTNQRGE IKYPIKGINI
201: LKAHGQSARD SYLLNGYALN TGRAAQGMPL RVSPAKIACL DFNLQKTKMQ LGVQVVVNDP RELEKIRQRE ADMTKERIEK LLKAGANVIL TTKGIDDMAL
301: KYFVEAGAIA VRRVRKEDMR HVAKATGATL VTTFADMEGE ETFDPAHLGT AEEVVEERIA DDDVVLIKGT KTSSAVSLIL RGANDYMLDE MERALHDALC
401: IVKRTLESNT VVAGGGAVES ALSVYLEHLA TTLGSREQLA IAEFADALLI IPKVLAVNAA KDATELVAKL RAYHHTAQTK ADKKHYSSMG LDLVNGTIRN
501: NLEAGVIEPA MSKVKIIQFA TEAAITILRI DDMIKLVKED GQGDERIQQR FPDTRDGLAT NGLSISEQLG EQKSPETPKS PLPCTDFDAA YFHSYAHVRI
601: HEEMIKASQH HSRVTVAFSS LQMILKEKKI VYAVDASDIA VQAEEVLKAN GLSDKDVEIE EEADVIVSEW MGYMLLSRDR WLKPGGLILP SHATLYMAPI
701: SHPDRYSHSI GFWRNVYGID MSAMMQLAKQ CAFEEPSVES ISGENVLTWP EAVFPCYVQS L

Best Arabidopsis Sequence Match ( AT3G20050.1 )
(BLAST)

001: MSISAQNPDI SGDRQSGQDV RTQNVMACQA VSNIVKTSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIVA
101: AELLKRANDL VRNKIHPTSI ISGYRLAMRE SCKYIEEKLV TKVEKLGKVP LINCAKTSMS SKLISGDSDF FANLVVEAVL SVKMTNQRGE IKYPIKGINI
201: LKAHGQSARD SYLLNGYALN TGRAAQGMPL RVSPAKIACL DFNLQKTKMQ LGVQVVVNDP RELEKIRQRE ADMTKERIEK LLKAGANVIL TTKGIDDMAL
301: KYFVEAGAIA VRRVRKEDMR HVAKATGATL VTTFADMEGE ETFDPAHLGS ADEVVEERIA DDDVILIKGT KTSSAVSLIL RGANDYMLDE MERALHDALC
401: IVKRTLESNT VVAGGGAVES ALSVYLEHLA TTLGSREQLA IAEFADALLI IPKVLAVNAA KDATELVAKL RAYHHTAQTK ADKKHYSSMG LDLVNGTIRN
501: NLEAGVIEPA MSKVKIIQFA TEAAITILRI DDMIKLVKDE SQGEE

Arabidopsis Description

CCT1T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P28769]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.