Factsheet for Bra035423.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001094.1-P	Field mustard	cytosol	89.73	36.68
Bra036422.1-P	Field mustard	cytosol	88.84	36.58
Bra031959.1-P	Field mustard	cytosol	87.95	36.21
Bra034807.1-P	Field mustard	cytosol	25.89	10.92
Bra001174.1-P	Field mustard	cytosol	26.79	10.81
Bra040242.1-P	Field mustard	cytosol	26.79	10.81
Bra001773.1-P	Field mustard	cytosol	26.34	10.81
Bra035820.1-P	Field mustard	cytosol	26.34	10.61
Bra001423.1-P	Field mustard	cytosol	26.34	10.54
Bra020134.1-P	Field mustard	cytosol	23.21	10.26
Bra038682.1-P	Field mustard	cytosol	25.0	10.09
Bra002337.1-P	Field mustard	cytosol	23.66	10.06
Bra021300.1-P	Field mustard	cytosol	23.66	9.98
Bra022292.1-P	Field mustard	cytosol, plastid	23.66	9.94
Bra032797.1-P	Field mustard	cytosol	23.66	9.91
Bra012506.1-P	Field mustard	cytosol	23.66	9.91
Bra010965.1-P	Field mustard	cytosol	23.21	9.72
Bra040591.1-P	Field mustard	cytosol	20.09	8.41
Bra008652.1-P	Field mustard	cytosol	19.64	8.21
Bra038252.1-P	Field mustard	cytosol	26.79	7.88
Bra006584.1-P	Field mustard	cytosol	23.66	7.09
Bra006338.1-P	Field mustard	cytosol	13.84	6.83

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.8	Gene3D:3.30.260.10	EnsemblPlantsGene:Bra035423	EnsemblPlants:Bra035423.1	EnsemblPlants:Bra035423.1-P
InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:GROEL-like_equatorial_sf	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4F2X3	PFAM:PF00118	PRINTS:PR00304
ScanProsite:PS00751	PANTHER:PTHR11353	PANTHER:PTHR11353:SF78	SUPFAM:SSF48592	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf
UniParc:UPI00025448E6	SEG:seg	:	:	:	:

Description

AT3G03960 (E=4e-047) | chaperonin, putative

Coordinates

chrA01:+:16419023..16420230

Molecular Weight (calculated)

23891.9 Da

IEP (calculated)

5.709

GRAVY (calculated)

0.045

Length

224 amino acids

Sequence
(BLAST)

001: MQLYGIQSML KEGYRHQAVI KNIKACKELS TITRTSLGPN DKLFVTNDAA TIVNELEIQH PAAKILVLAA KALQEEIGDG ATLTISFAGE LLQNTDCGGA
101: YQDGVVEVLE ELVESGSERM DVHSKDEVVS RMRAAVASKQ FGQEEIICSL VADACIQVCP KNPTNFNVGN VRVAKLLAGG LHNSCIVRGM VLESDAVGSI
201: KRMVKAKVAL FAGGGVDTTA TETK

Best Arabidopsis Sequence Match ( AT3G03960.1 )
(BLAST)

001: MVGMSMQPYG IQSMLKEGYR HLSGLDEAVI KNIEACKELS TITRTSLGPN GMNKMVINHL DKLFVTNDAA TIVNELEIQH PAAKLLVLAA KAQQEEIGDG
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED

Arabidopsis Description

CCT8T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.