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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29973 Canola cytosol 99.63 99.63
Bra001094.1-P Field mustard cytosol 98.53 97.81
Bra031959.1-P Field mustard cytosol 96.14 96.14
AT3G03960.1 Thale cress cytosol 96.88 95.99
Bra035423.1-P Field mustard cytosol 36.58 88.84
VIT_08s0007g07460.t01 Wine grape cytosol 84.38 84.22
Solyc01g088080.2.1 Tomato nucleus 82.72 83.18
KRH08492 Soybean cytosol, endoplasmic reticulum, nucleus 83.27 83.12
KRH70153 Soybean nucleus 83.09 82.94
PGSC0003DMT400017609 Potato cytosol 81.99 82.44
GSMUA_Achr8P04580_001 Banana cytosol 82.35 82.35
GSMUA_Achr3P25570_001 Banana cytosol 82.17 82.17
Os03t0804800-01 Rice cytosol, extracellular, plasma membrane, plastid 82.35 82.05
EES09994 Sorghum cytosol 82.17 81.57
Zm00001d052948_P001 Maize cytosol, extracellular, mitochondrion 81.99 81.39
TraesCS4B01G165400.1 Wheat cytosol 78.86 79.44
HORVU4Hr1G040660.1 Barley cytosol 78.68 79.26
TraesCS4D01G157300.1 Wheat cytosol 77.94 78.96
TraesCS4A01G164900.2 Wheat cytosol 78.68 78.68
Zm00001d007508_P005 Maize cytosol 81.43 77.31
TraesCS6B01G010900.1 Wheat mitochondrion, plastid 72.43 74.2
TraesCS6D01G008000.1 Wheat cytosol 74.82 71.4
Bra001773.1-P Field mustard cytosol 27.76 27.66
Bra035820.1-P Field mustard cytosol 27.57 26.98
Bra001174.1-P Field mustard cytosol 27.21 26.67
Bra040242.1-P Field mustard cytosol 27.02 26.49
Bra020134.1-P Field mustard cytosol 24.26 26.04
Bra022292.1-P Field mustard cytosol, plastid 25.18 25.7
Bra002337.1-P Field mustard cytosol 24.82 25.62
Bra021300.1-P Field mustard cytosol 25.0 25.61
Bra034807.1-P Field mustard cytosol 24.63 25.24
Bra001423.1-P Field mustard cytosol 25.92 25.18
Bra038682.1-P Field mustard cytosol 25.37 24.86
Bra012506.1-P Field mustard cytosol 23.35 23.74
Bra010965.1-P Field mustard cytosol 23.16 23.55
Bra040591.1-P Field mustard cytosol 22.98 23.36
Bra032797.1-P Field mustard cytosol 22.98 23.36
Bra008652.1-P Field mustard cytosol 22.43 22.76
Bra006338.1-P Field mustard cytosol 18.2 21.81
Bra038252.1-P Field mustard cytosol 27.57 19.71
Bra006584.1-P Field mustard cytosol 24.63 17.91
Protein Annotations
Gene3D:1.10.560.10MapMan:20.3.1.8Gene3D:3.50.7.10EnsemblPlantsGene:Bra036422EnsemblPlants:Bra036422.1EnsemblPlants:Bra036422.1-P
InterPro:Chap_CCT_thetaInterPro:Chaperone_TCP-1InterPro:Chaperonin_TCP-1_CSncoils:CoilInterPro:Cpn60/TCP-1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006457GO:GO:0008150GO:GO:0009987GO:GO:0051082
InterPro:GROEL-like_equatorial_sfInterPro:GroEL-like_apical_dom_sfInterPro:IPR027409InterPro:IPR027410InterPro:IPR027413UniProt:M4F5R6
PFAM:PF00118PRINTS:PR00304ScanProsite:PS00750ScanProsite:PS00751PANTHER:PTHR11353PANTHER:PTHR11353:SF78
SUPFAM:SSF48592SUPFAM:SSF52029SUPFAM:SSF54849InterPro:TCP-1-like_intermed_sfTIGRFAMs:TIGR02346UniParc:UPI0002540F8F
SEG:seg:::::
Description
AT3G03960 (E=1e-289) | chaperonin, putative
Coordinates
chrA07:+:550711..553533
Molecular Weight (calculated)
58437.1 Da
IEP (calculated)
5.007
GRAVY (calculated)
-0.069
Length
544 amino acids
Sequence
(BLAST)
001: MQPYGIQSML KEGYRHLSGL DEAVIKNIEA CKELSTITRT SLGPNGMNKM VINHLDKLFV TNDAATIVNE LEIQHPAAKI LVLAAKAQQE EIGDGANLTI
101: SFAGELLQNA EELIRMGLHP SEIISGYNKA IIKVVEILEQ LVESGSETMD VRDKDEVVSR MRAAVASKQF GQEEIICSLV ADACIQVCPK NPTNFNVDNV
201: RVAKLLGGGL HNSCIVRGMV LKSDAVGSIK RMEKAKVAVF AGGVDTTATE TKGTVLIHSA EQLENYAKTE EAKVEELIKA VADSGAKVIV SGGSVGEMAL
301: HFCERYKIMV LKISSKFELR RFCRTAGAVA HLKLSRPSPD DLGYVDSISV EEIGGVTVTI ARNEQGGNSI STVVLRGSTD SILDDLERAV DDGVNTYKAM
401: CRDSRIVPGA AATEIELAQR LKEYANAETG LDKYAITKYA ESFEFVPKTL ADNAGLNAME IIASLYTGHG SGNTKLGIDL EEGACKDVSE TKVWDLFATK
501: LFALKYASDA ACTVLRVDQI IMAKQAGGPR RDAAQAAGAG AEED
Best Arabidopsis Sequence Match ( AT3G03960.1 )
(BLAST)
001: MVGMSMQPYG IQSMLKEGYR HLSGLDEAVI KNIEACKELS TITRTSLGPN GMNKMVINHL DKLFVTNDAA TIVNELEIQH PAAKLLVLAA KAQQEEIGDG
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED
Arabidopsis Description
CCT8T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.