Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29973 | Canola | cytosol | 95.99 | 96.88 |
| Bra036422.1-P | Field mustard | cytosol | 95.99 | 96.88 |
| CDY21153 | Canola | cytosol | 95.81 | 96.69 |
| CDX92056 | Canola | cytosol | 95.63 | 95.8 |
| CDX74202 | Canola | cytosol, plasma membrane | 95.45 | 95.62 |
| Bra001094.1-P | Field mustard | cytosol | 95.45 | 95.62 |
| Bra031959.1-P | Field mustard | cytosol | 93.26 | 94.12 |
| CDY42892 | Canola | cytosol | 93.08 | 93.93 |
| CDY50868 | Canola | cytosol | 92.71 | 93.57 |
| VIT_08s0007g07460.t01 | Wine grape | cytosol | 82.88 | 83.49 |
| KRH70153 | Soybean | nucleus | 81.6 | 82.2 |
| KRH08492 | Soybean | cytosol, endoplasmic reticulum, nucleus | 81.42 | 82.02 |
| Solyc01g088080.2.1 | Tomato | nucleus | 80.51 | 81.7 |
| Os03t0804800-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 81.06 | 81.5 |
| EES09994 | Sorghum | cytosol | 81.24 | 81.39 |
| GSMUA_Achr3P25570_001 | Banana | cytosol | 80.51 | 81.25 |
| PGSC0003DMT400017609 | Potato | cytosol | 79.96 | 81.15 |
| GSMUA_Achr8P04580_001 | Banana | cytosol | 80.15 | 80.88 |
| Zm00001d052948_P001 | Maize | cytosol, extracellular, mitochondrion | 80.51 | 80.66 |
| HORVU4Hr1G040660.1 | Barley | cytosol | 77.41 | 78.7 |
| TraesCS4B01G165400.1 | Wheat | cytosol | 77.41 | 78.7 |
| TraesCS4D01G157300.1 | Wheat | cytosol | 76.5 | 78.21 |
| TraesCS4A01G164900.2 | Wheat | cytosol | 77.23 | 77.94 |
| Zm00001d007508_P005 | Maize | cytosol | 80.15 | 76.79 |
| TraesCS6B01G010900.1 | Wheat | mitochondrion, plastid | 71.04 | 73.45 |
| TraesCS6D01G008000.1 | Wheat | cytosol | 73.77 | 71.05 |
| AT3G20050.1 | Thale cress | cytosol | 27.69 | 27.89 |
| AT5G20890.1 | Thale cress | cytosol | 25.14 | 26.19 |
| AT3G11830.1 | Thale cress | cytosol | 26.23 | 25.85 |
| AT5G26360.1 | Thale cress | cytosol | 25.87 | 25.59 |
| AT3G18190.1 | Thale cress | cytosol, plastid | 24.95 | 25.56 |
| AT1G24510.1 | Thale cress | cytosol | 23.86 | 24.49 |
| AT3G02530.1 | Thale cress | cytosol | 22.4 | 22.99 |
| AT5G16070.1 | Thale cress | cytosol | 22.04 | 22.62 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:20.3.1.8 | Gene3D:3.30.260.10 | Gene3D:3.50.7.10 | EntrezGene:819549 | UniProt:A0A178V993 |
| ProteinID:AAF05855.1 | ProteinID:AEE74018.1 | EMBL:AF370490 | ArrayExpress:AT3G03960 | EnsemblPlantsGene:AT3G03960 | RefSeq:AT3G03960 |
| TAIR:AT3G03960 | RefSeq:AT3G03960-TAIR-G | EnsemblPlants:AT3G03960.1 | TAIR:AT3G03960.1 | Unigene:At.23419 | EMBL:BT010388 |
| InterPro:Chap_CCT_theta | InterPro:Chaperone_TCP-1 | InterPro:Chaperonin_TCP-1_CS | ncoils:Coil | InterPro:Cpn60/TCP-1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005832 | GO:GO:0006457 | GO:GO:0006458 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0044183 |
| GO:GO:0051050 | GO:GO:0051082 | GO:GO:0061077 | InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 |
| InterPro:IPR027410 | InterPro:IPR027413 | RefSeq:NP_566219.1 | ProteinID:OAP02850.1 | PFAM:PF00118 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00304 |
| ScanProsite:PS00750 | ScanProsite:PS00751 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF78 | UniProt:Q94K05 | SUPFAM:SSF48592 |
| SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02346 | UniParc:UPI00000A3141 | SEG:seg |
Description
CCT8T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]
Coordinates
chr3:+:1024144..1027891
Molecular Weight (calculated)
58942.9 Da
IEP (calculated)
5.014
GRAVY (calculated)
-0.057
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGMSMQPYG IQSMLKEGYR HLSGLDEAVI KNIEACKELS TITRTSLGPN GMNKMVINHL DKLFVTNDAA TIVNELEIQH PAAKLLVLAA KAQQEEIGDG
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.