Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29973 | Canola | cytosol | 99.45 | 99.45 |
| CDX74202 | Canola | cytosol, plasma membrane | 98.71 | 97.99 |
| CDX92056 | Canola | cytosol | 98.71 | 97.99 |
| AT3G03960.1 | Thale cress | cytosol | 96.69 | 95.81 |
| CDY42892 | Canola | cytosol | 95.77 | 95.77 |
| CDY50868 | Canola | cytosol | 95.4 | 95.4 |
| CDY50320 | Canola | cytosol | 42.1 | 86.74 |
| CDX79329 | Canola | cytosol | 40.99 | 84.47 |
| VIT_08s0007g07460.t01 | Wine grape | cytosol | 83.82 | 83.67 |
| Solyc01g088080.2.1 | Tomato | nucleus | 82.17 | 82.62 |
| KRH08492 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.72 | 82.57 |
| KRH70153 | Soybean | nucleus | 82.54 | 82.39 |
| GSMUA_Achr3P25570_001 | Banana | cytosol | 81.99 | 81.99 |
| PGSC0003DMT400017609 | Potato | cytosol | 81.43 | 81.89 |
| GSMUA_Achr8P04580_001 | Banana | cytosol | 81.8 | 81.8 |
| Os03t0804800-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 81.8 | 81.5 |
| EES09994 | Sorghum | cytosol | 81.62 | 81.02 |
| Zm00001d052948_P001 | Maize | cytosol, extracellular, mitochondrion | 81.43 | 80.84 |
| TraesCS4B01G165400.1 | Wheat | cytosol | 78.31 | 78.89 |
| HORVU4Hr1G040660.1 | Barley | cytosol | 78.12 | 78.7 |
| TraesCS4D01G157300.1 | Wheat | cytosol | 77.39 | 78.4 |
| TraesCS4A01G164900.2 | Wheat | cytosol | 78.12 | 78.12 |
| Zm00001d007508_P005 | Maize | cytosol | 80.88 | 76.79 |
| TraesCS6B01G010900.1 | Wheat | mitochondrion, plastid | 71.88 | 73.63 |
| TraesCS6D01G008000.1 | Wheat | cytosol | 74.26 | 70.88 |
| CDY43747 | Canola | cytosol | 7.17 | 30.47 |
| CDY11302 | Canola | cytosol | 7.17 | 30.47 |
| CDY72106 | Canola | cytosol | 11.21 | 28.77 |
| CDY72126 | Canola | cytosol | 11.21 | 28.77 |
| CDY24564 | Canola | cytosol | 27.94 | 27.89 |
| CDX82264 | Canola | cytosol | 27.94 | 27.89 |
| CDY36063 | Canola | cytosol | 27.94 | 27.89 |
| CDY25374 | Canola | cytosol | 27.94 | 27.89 |
| CDY42227 | Canola | cytosol | 27.76 | 27.71 |
| CDX74120 | Canola | cytosol | 27.39 | 26.85 |
| CDY33444 | Canola | cytosol | 27.57 | 26.64 |
| CDY18835 | Canola | cytosol | 27.02 | 26.49 |
| CDY49990 | Canola | cytosol | 27.39 | 26.33 |
| CDY09085 | Canola | cytosol | 25.0 | 25.81 |
| CDX92212 | Canola | cytosol, plastid | 25.18 | 25.7 |
| CDX70950 | Canola | cytosol | 24.82 | 25.62 |
| CDX92428 | Canola | cytosol | 24.82 | 25.62 |
| CDY16573 | Canola | cytosol | 24.82 | 25.62 |
| CDY18509 | Canola | cytosol | 25.0 | 25.61 |
| CDY24438 | Canola | cytosol, plastid | 25.0 | 25.52 |
| CDX95541 | Canola | cytosol, plastid | 24.82 | 25.28 |
| CDY08491 | Canola | cytosol | 22.98 | 24.8 |
| CDY01062 | Canola | cytosol | 22.98 | 24.8 |
| CDY53919 | Canola | cytosol | 23.16 | 24.66 |
| CDX73850 | Canola | cytosol | 23.16 | 24.56 |
| CDY47913 | Canola | cytosol | 11.58 | 24.14 |
| CDY71043 | Canola | cytosol | 13.79 | 23.81 |
| CDY51593 | Canola | cytosol | 23.35 | 23.69 |
| CDY36138 | Canola | cytosol | 23.16 | 23.55 |
| CDY54836 | Canola | cytosol | 23.16 | 23.55 |
| CDY03881 | Canola | cytosol | 23.16 | 23.55 |
| CDY51544 | Canola | cytosol | 22.98 | 23.36 |
| CDY28697 | Canola | cytosol | 22.98 | 23.36 |
| CDX84951 | Canola | cytosol | 22.98 | 23.36 |
| CDY67306 | Canola | cytosol | 14.34 | 23.08 |
| CDX78670 | Canola | cytosol | 22.61 | 22.99 |
| CDX70671 | Canola | cytosol | 22.61 | 22.99 |
| CDY26490 | Canola | cytosol | 22.61 | 22.95 |
| CDX69477 | Canola | cytosol | 22.61 | 22.95 |
| CDX88835 | Canola | mitochondrion | 24.82 | 17.76 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:20.3.1.8 | Gene3D:3.50.7.10 | GO:A0A078G8X2 | UniProt:A0A078G8X2 | EnsemblPlants:CDY21153 |
| ProteinID:CDY21153 | ProteinID:CDY21153.1 | InterPro:Chap_CCT_theta | InterPro:Chaperone_TCP-1 | InterPro:Chaperonin_TCP-1_CS | ncoils:Coil |
| InterPro:Cpn60/TCP-1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051082 | InterPro:GROEL-like_equatorial_sf | EnsemblPlantsGene:GSBRNA2T00015342001 | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 |
| InterPro:IPR027410 | InterPro:IPR027413 | PFAM:PF00118 | PRINTS:PR00304 | ScanProsite:PS00750 | ScanProsite:PS00751 |
| PANTHER:PTHR11353 | PANTHER:PTHR11353:SF78 | SUPFAM:SSF48592 | SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf |
| TIGRFAMs:TIGR02346 | UniParc:UPI0003E72077 | SEG:seg | : | : | : |
Description
BnaA01g33840DBnaA01g33840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8X2]
Coordinates
chrLK032116:-:326858..330123
Molecular Weight (calculated)
58449.1 Da
IEP (calculated)
5.009
GRAVY (calculated)
-0.066
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPYGIQSML KEGYRHLSGL DEAVIKNIEA CKELSTITRT SLGPNGMNKM VINHLDKLFV TNDAATIVNE LEIQHPAAKI LVLAAKAQQE EIGDGANLTI
101: SFAGELLQNA EELIRMGLHP SEIISGYNKA IIKVVEILEQ LVESGSETMD VRDKDEVVSR MRAAVASKQF GQEEIICSLV ADACIQVCPK NPTNFNVDNV
201: RVAKLLGGGL HNSCIVRGMV LRSDAVGSIK RMEKAKVAVF AGGVDTTATE TKGTVLIHSA EQLENYAKTE EAKVEELIKA VAESGAKVIV SGGSVGEMAL
301: HFCERYKIMV LKISSKFELR RFCRAAGAVA HLKLSRPSPD DLGYVDSISV EEIGGVTVTI ARNEQGGNSI STVVLRGSTD SILDDLERAV DDGVNTYKAM
401: CRDSRIVPGA AATEIELAQR LKEYANAETG LDKYAITKYA ESFEFVPKTL ADNAGLNAME IIASLYTGHG SGNTKLGIDL EEGACKDVSE TKVWDLFATK
501: LFALKYASDA ACTVLRVDQI IMAKQAGGPR RDAAQAAGAG AEED
101: SFAGELLQNA EELIRMGLHP SEIISGYNKA IIKVVEILEQ LVESGSETMD VRDKDEVVSR MRAAVASKQF GQEEIICSLV ADACIQVCPK NPTNFNVDNV
201: RVAKLLGGGL HNSCIVRGMV LRSDAVGSIK RMEKAKVAVF AGGVDTTATE TKGTVLIHSA EQLENYAKTE EAKVEELIKA VAESGAKVIV SGGSVGEMAL
301: HFCERYKIMV LKISSKFELR RFCRAAGAVA HLKLSRPSPD DLGYVDSISV EEIGGVTVTI ARNEQGGNSI STVVLRGSTD SILDDLERAV DDGVNTYKAM
401: CRDSRIVPGA AATEIELAQR LKEYANAETG LDKYAITKYA ESFEFVPKTL ADNAGLNAME IIASLYTGHG SGNTKLGIDL EEGACKDVSE TKVWDLFATK
501: LFALKYASDA ACTVLRVDQI IMAKQAGGPR RDAAQAAGAG AEED
001: MVGMSMQPYG IQSMLKEGYR HLSGLDEAVI KNIEACKELS TITRTSLGPN GMNKMVINHL DKLFVTNDAA TIVNELEIQH PAAKLLVLAA KAQQEEIGDG
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED
Arabidopsis Description
CCT8T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.