CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050534	Potato	cytosol	87.94	87.66
Os05t0556700-01	Rice	cytosol, plasma membrane	87.62	84.15
Zm00001d040688_P001	Maize	cytosol	64.13	71.89
PGSC0003DMT400033155	Potato	cytosol	75.56	67.42
CDY16573	Canola	cytosol	99.68	59.58
CDY09085	Canola	cytosol	99.68	59.58
CDX92428	Canola	cytosol	99.68	59.58
CDX70950	Canola	cytosol	99.37	59.39
VIT_18s0001g00480.t01	Wine grape	cytosol	91.75	54.63
TraesCS4D01G250100.1	Wheat	cytosol	86.67	54.6
TraesCS4B01G250200.1	Wheat	cytosol	86.67	54.6
GSMUA_Achr2P01800_001	Banana	cytosol	91.11	54.46
KRH25193	Soybean	nucleus	90.79	54.27
KRH30467	Soybean	nucleus	90.48	54.08
Solyc11g069000.1.1	Tomato	extracellular	89.52	53.61
EES00491	Sorghum	cytosol	89.21	53.52
Os03t0619400-01	Rice	plasma membrane	88.89	53.33
Zm00001d040257_P001	Maize	cytosol	88.25	52.95
TraesCS4A01G054800.1	Wheat	cytosol, unclear	87.3	52.38
Zm00001d008369_P001	Maize	cytosol, nucleus	87.3	52.38
EES00273	Sorghum	cytosol	84.76	52.35
TraesCS5A01G342600.1	Wheat	cytosol	86.98	51.89
TraesCS5D01G347400.1	Wheat	cytosol	86.98	51.89
TraesCS5B01G341900.1	Wheat	cytosol	86.98	51.6
HORVU5Hr1G085530.1	Barley	mitochondrion	86.98	49.91
HORVU4Hr1G068820.1	Barley	cytosol	87.3	49.11
GSMUA_Achr3P24440_001	Banana	peroxisome	83.49	47.82
CDX88835	Canola	mitochondrion	99.05	41.05
Zm00001d052882_P001	Maize	plastid	39.37	24.46
CDY01062	Canola	cytosol	30.16	18.85
CDX73850	Canola	cytosol	30.16	18.52
CDY08491	Canola	cytosol	29.52	18.45
CDY53919	Canola	cytosol	29.52	18.2
CDY42227	Canola	cytosol	30.48	17.61
CDX95541	Canola	cytosol, plastid	29.84	17.6
CDY18509	Canola	cytosol	29.52	17.51
CDX92212	Canola	cytosol, plastid	29.52	17.45
CDY24438	Canola	cytosol, plastid	29.52	17.45
CDY36063	Canola	cytosol	30.16	17.43
CDX82264	Canola	cytosol	30.16	17.43
CDY25374	Canola	cytosol	30.16	17.43
CDY24564	Canola	cytosol	30.16	17.43
CDY33444	Canola	cytosol	30.48	17.05
CDY51544	Canola	cytosol	26.67	15.7
CDY28697	Canola	cytosol	26.67	15.7
CDX70671	Canola	cytosol	26.35	15.51
CDX78670	Canola	cytosol	26.35	15.51
CDY26490	Canola	cytosol	26.35	15.49
CDX69477	Canola	cytosol	26.35	15.49
CDX84951	Canola	cytosol	25.71	15.14
CDY03881	Canola	cytosol	25.71	15.14
CDY36138	Canola	cytosol	25.71	15.14
CDY54836	Canola	cytosol	25.71	15.14
CDY51593	Canola	cytosol	25.71	15.11
CDY50868	Canola	cytosol	25.08	14.52
CDY42892	Canola	cytosol	24.76	14.34
CDY18835	Canola	cytosol	24.76	14.05
CDX74120	Canola	cytosol	24.76	14.05
CDY29973	Canola	cytosol	23.81	13.79
CDY21153	Canola	cytosol	23.81	13.79
CDY49990	Canola	cytosol	24.76	13.78
CDX74202	Canola	cytosol, plasma membrane	23.81	13.69
CDX92056	Canola	cytosol	23.81	13.69
CDY67306	Canola	cytosol	13.97	13.02
CDY47913	Canola	cytosol	4.13	4.98
CDX79329	Canola	cytosol	4.13	4.92
CDY50320	Canola	cytosol	3.49	4.17
TraesCS3B01G595300.1	Wheat	cytosol	1.59	3.7
CDY11302	Canola	cytosol	0.0	0.0
CDY72126	Canola	cytosol	0.0	0.0
CDY43747	Canola	cytosol	0.0	0.0
CDY72106	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.2	Gene3D:3.50.7.10	GO:A0A078JTZ5	UniProt:A0A078JTZ5	EnsemblPlants:CDY71043
ProteinID:CDY71043	ProteinID:CDY71043.1	InterPro:Chap_CCT_beta	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00010760001	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027413
PFAM:PF00118	PANTHER:PTHR11353	PANTHER:PTHR11353:SF23	SUPFAM:SSF48592	SUPFAM:SSF52029	TIGRFAMs:TIGR02341
UniParc:UPI0004EEF406	:	:	:	:	:

Description

BnaAnng35880DBnaAnng35880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTZ5]

Coordinates

chrLK044249:-:1369..2755

Molecular Weight (calculated)

34328.5 Da

IEP (calculated)

5.298

GRAVY (calculated)

-0.054

Length

315 amino acids

Sequence
(BLAST)

001: FILDKKIGIG QPKRIENAKI LVANTAMDTD KVKIYGARVR VDSMTKVAEI EGAEKEKMKD KVNKILAHGI NCFVNRQLIY NFPEELFADA GVLAIEHADF
101: EGIERLGLVT GGEIASTFDN PESVKLGHCK LIEEIMIGED KLIHFSGVAM GQACSIVLRG ASHHVLDEAE RSLHDALCVL SQTVNDSRVL LGGGWPEMVM
201: AKEVDELARK TAGKKSHAIE AFSRALVAIP TTIADNAGLD SAELVAQLRA EHHNEGCNAG IDVISGAVGD MEERGIYEAF KVKQAVLLSA TEAAEMILRV
301: DEIITCAPRR REDRM

Best Arabidopsis Sequence Match ( AT5G20890.1 )
(BLAST)

001: MPIDKIFKDD ASEEKGERAR MASFVGAMAI SDLVKSTLGP KGMDKILQST GRGHAVTVTN DGATILKSLH IDNPAAKVLV DISKVQDDEV GDGTTSVVVL
101: AGELLREAEK LVASKIHPMT IIAGYRMASE CARNALLKRV IDNKDNAEKF RSDLLKIAMT TLCSKILSQD KEHFAEMAVD AVFRLKGSTN LEAIQIIKKP
201: GGSLKDSFLD EGFILDKKIG IGQPKRIENA NILVANTAMD TDKVKIYGAR VRVDSMTKVA EIEGAEKEKM KDKVKKIIGH GINCFVNRQL IYNFPEELFA
301: DAGILAIEHA DFEGIERLGL VTGGEIASTF DNPESVKLGH CKLIEEIMIG EDKLIHFSGC EMGQACSIVL RGASHHVLDE AERSLHDALC VLSQTVNDTR
401: VLLGGGWPEM VMAKEVDELA RKTAGKKSHA IEAFSRALVA IPTTIADNAG LDSAELVAQL RAEHHTEGCN AGIDVITGAV GDMEERGIYE AFKVKQAVLL
501: SATEASEMIL RVDEIITCAP RRREDRM

Arabidopsis Description

CCT2T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q940P8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.