Factsheet for Zm00001d052882_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0556700-01	Rice	cytosol, plasma membrane	27.61	42.68
Zm00001d008369_P001	Maize	cytosol, nucleus	42.6	41.14
Zm00001d040257_P001	Maize	cytosol	42.01	40.57
Solyc11g069000.1.1	Tomato	extracellular	41.62	40.11
VIT_18s0001g00480.t01	Wine grape	cytosol	41.81	40.08
GSMUA_Achr2P01800_001	Banana	cytosol	41.62	40.04
KRH30467	Soybean	nucleus	41.22	39.66
KRH25193	Soybean	nucleus	41.22	39.66
Bra020134.1-P	Field mustard	cytosol	39.65	39.65
CDY71043	Canola	cytosol	24.46	39.37
CDX70950	Canola	cytosol	40.43	38.9
Bra002337.1-P	Field mustard	cytosol	40.24	38.71
CDY16573	Canola	cytosol	40.24	38.71
CDX92428	Canola	cytosol	40.24	38.71
CDY09085	Canola	cytosol	39.84	38.33
AT5G20890.1	Thale cress	cytosol	39.84	38.33
CDY72126	Canola	cytosol	15.38	36.79
CDY72106	Canola	cytosol	15.38	36.79
GSMUA_Achr3P24440_001	Banana	peroxisome	39.84	36.73
Zm00001d040688_P001	Maize	cytosol	19.72	35.59
Bra006584.1-P	Field mustard	cytosol	40.04	27.14
CDX88835	Canola	mitochondrion	40.04	26.71
PGSC0003DMT400019727	Potato	cytosol	4.93	17.99
Zm00001d018349_P001	Maize	cytosol	19.13	17.8
Zm00001d052056_P005	Maize	plasma membrane	18.93	17.61
Zm00001d051742_P001	Maize	plastid	18.15	17.2
Zm00001d053857_P002	Maize	cytosol	18.74	16.96
Zm00001d027371_P001	Maize	plasma membrane	17.75	16.82
Zm00001d007960_P001	Maize	cytosol	18.15	16.79
Zm00001d018694_P002	Maize	cytosol	17.95	16.61
Zm00001d007192_P001	Maize	cytosol	16.37	15.4
Zm00001d028183_P002	Maize	cytosol	14.4	13.08
Zm00001d052948_P001	Maize	cytosol, extracellular, mitochondrion	13.02	12.04
Zm00001d053553_P002	Maize	cytosol	14.4	11.2
Zm00001d007508_P005	Maize	cytosol	12.62	11.17

Protein Annotations

Gene3D:3.30.260.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A1D6QKM8	ProteinID:AQK58274.1	InterPro:Chap_CCT_beta
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0051082	InterPro:Glycosyltransferase_61	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	PFAM:PF00118	PFAM:PF04577	PANTHER:PTHR11353	PANTHER:PTHR11353:SF23
SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TMHMM:TMhelix	UniParc:UPI000845624B	EnsemblPlantsGene:Zm00001d052882
EnsemblPlants:Zm00001d052882_P001	EnsemblPlants:Zm00001d052882_T001	SEG:seg	:	:	:

Description

Putative TCP-1/cpn60 chaperonin family protein

Coordinates

chr4:+:203237227..203240756

Molecular Weight (calculated)

55460.0 Da

IEP (calculated)

4.674

GRAVY (calculated)

0.211

Length

507 amino acids

Sequence
(BLAST)

001: MAAFIDFFTL SSSSITNSRS DNFFFISLME LNFLDVLSGC LETRSITTPL QSLQGIRGSS ALAVLEPESK DDDDDGGISS NSLKDHSNDK LPVNVCSDKF
101: RADLMNIAMT TLSSKILSQD KEYFAELAVD AVLRLKGSTN LEAIQILKKP GGSLKDSFLD EGFILDKKIG IGQPKRIENA KILVANSAMD TDLRLWGMQL
201: IYNFPEELFA DAGILAIEHA DFEGIERLAL VTGGEIASTF DNPESVKLGH CKVIEEIMIR EDMLIHLAVT SGGTADDIAS RGCEELGGGG RRDPRWYYLN
301: VSLILVDRCV AKRVSISYLV IVSYNICLFF QLLNIILFLK CKVNVVDGPF AHMTMKEQLR AILEASVVIG AHGAGLTHLV SATPDTKVLE IISSMYGPPH
401: FALISHGKSL EYHAINLPGS FARITDVIAV DYCCKIGYGF LDVADATDST KSETDLVLTE HGLLSLSSAV QISLEICQMM KGCVVYGVSS VLFYFYGAWS
501: CPDLQCW

Best Arabidopsis Sequence Match ( AT5G55500.1 )
(BLAST)

001: MSKRNPKILK IFLYMLLLNS LFLIIYFVFH SSSFSPEQSQ PPHIYHVSVN NQSAIQKPWP ILPSYLPWTP PQRNLPTGSC EGYFGNGFTK RVDFLKPRIG
101: GGGEGSWFRC FYSETLQSSI CEGRNLRMVP DRIVMSRGGE KLEEVMGRKE EEELPAFRQG AFEVAEEVSS RLGFKRHRRF GGGEGGSAVS RRLVNDEMLN
201: EYMQEGGIDR HTMRDLVASI RAVDTNDFVC EEWVEEPTLL VTRFEYANLF HTVTDWYSAY VSSRVTGLPN RPHVVFVDGH CTTQLEETWT ALFSGIRYAK
301: NFTKPVCFRH AILSPLGYET ALFKGLSGEI DCKGDSAHNL WQNPDDKRTA RISEFGEMIR AAFGLPVNRH RSLEKPLSSS SSSASVYNVL FVRREDYLAH
401: PRHGGKVQSR LINEEEVFDS LHHWVATGST GLTKCGINLV NGLLAHMSMK DQVRAIQDAS VIIGAHGAGL THIVSATPNT TIFEIISVEF QRPHFELIAK
501: WKGLEYHAMH LANSRAEPTA VIEKLTEIMK SLGC

Arabidopsis Description

XYLTGlycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUA9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.