Factsheet for Zm00001d007192_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97762	Sorghum	cytosol	97.22	97.94
Os05t0147400-01	Rice	cytosol, plasma membrane, plastid	95.73	96.45
GSMUA_Achr1P14710_001	Banana	cytosol	91.65	92.34
TraesCS6D01G383500.1	Wheat	unclear	90.54	91.22
TraesCS6A01G399300.1	Wheat	golgi	90.54	91.22
GSMUA_Achr4P16540_001	Banana	cytosol	90.54	91.22
VIT_14s0006g03200.t01	Wine grape	cytosol	89.61	90.28
PGSC0003DMT400062134	Potato	cytosol	89.05	89.72
Solyc02g063090.2.1	Tomato	nucleus, unclear	89.05	89.72
Solyc02g085790.2.1	Tomato	extracellular	88.13	88.78
PGSC0003DMT400033011	Potato	cytosol	87.76	88.41
AT3G02530.1	Thale cress	cytosol	87.57	88.22
Bra040591.1-P	Field mustard	cytosol	87.57	88.22
CDY51544	Canola	cytosol	87.38	88.04
CDY28697	Canola	cytosol	87.38	88.04
CDX78670	Canola	cytosol	87.38	88.04
CDX70671	Canola	cytosol	87.38	88.04
KRH01781	Soybean	nucleus	87.2	87.85
AT5G16070.1	Thale cress	cytosol	87.01	87.66
KRH46911	Soybean	endoplasmic reticulum	87.01	87.66
CDY26490	Canola	cytosol	86.83	87.31
CDX69477	Canola	cytosol	86.83	87.31
Bra008652.1-P	Field mustard	cytosol	86.83	87.31
Bra006338.1-P	Field mustard	cytosol	73.47	87.22
HORVU6Hr1G091690.4	Barley	cytosol, plastid	90.17	85.26
Zm00001d040257_P001	Maize	cytosol	29.31	30.1
Zm00001d008369_P001	Maize	cytosol, nucleus	28.76	29.52
Zm00001d018694_P002	Maize	cytosol	27.09	26.64
Zm00001d007960_P001	Maize	cytosol	27.09	26.64
Zm00001d018349_P001	Maize	cytosol	26.9	26.61
Zm00001d052056_P005	Maize	plasma membrane	26.72	26.42
Zm00001d027371_P001	Maize	plasma membrane	25.97	26.17
Zm00001d051742_P001	Maize	plastid	25.79	25.98
Zm00001d028183_P002	Maize	cytosol	26.35	25.45
Zm00001d053857_P002	Maize	cytosol	25.42	24.46
Zm00001d052948_P001	Maize	cytosol, extracellular, mitochondrion	24.68	24.27
Zm00001d040688_P001	Maize	cytosol	12.43	23.84
Zm00001d007508_P005	Maize	cytosol	24.12	22.69
Zm00001d053553_P002	Maize	cytosol	26.35	21.78
Zm00001d052882_P001	Maize	plastid	15.4	16.37

Protein Annotations

Gene3D:1.10.560.10	EntrezGene:100193477	MapMan:20.3.1.6	Gene3D:3.50.7.10	UniProt:A0A1D6F4L0	InterPro:Chap_CCT_zeta
InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	ProteinID:ONM26261.1	PFAM:PF00118	PRINTS:PR00304
ScanProsite:PS00750	ScanProsite:PS00751	PANTHER:PTHR11353	PANTHER:PTHR11353:SF21	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02347	UniParc:UPI000845104B	EnsemblPlantsGene:Zm00001d007192	EnsemblPlants:Zm00001d007192_P001
EnsemblPlants:Zm00001d007192_T001	SEG:seg	:	:	:	:

Description

T-complex protein 1 subunit zeta

Coordinates

chr2:+:224425013..224429818

Molecular Weight (calculated)

59620.1 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.244

Length

539 amino acids

Sequence
(BLAST)

001: MSLRVLNPNA EVLNKSAALH MNINAAKGLQ DVLKTNLGPK GTIKMLVGGA GDLKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDTSGDG TTSTVLFIGE
101: LMKQSERCID EGTHPRFLVD GFDVAKRACL DFLDKFKTPV VTGEEPDRDT LKMVARTTLR TKLYEGLADQ LTDIVVNAVL CIRKPDEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CYILTCNVSL EYEKSEINAG FFYSNAEQRE KMVAAERRQV DERVKQIIEL KNKVCAGGDK NFVVINQKGI
301: DPPSLDLLAR AGIIALRRAK RRNMERLVLA CGGEAVNSVD ELTEDCLGWA GLVYEHVLGE EKYTFVENVK NPRSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTVEDEAV VLGAGAFEVA AKKHLIDNVK KTVKGSWQQR AQLGVEAFAE ALLVIPKTLA ENSGLDTQDV IVSLQNEHDR GLVVGLNHHS GDPIDPQMEG
501: IFDNYSVKRQ IINSGPIIAS QLLLVDEVIR AGRNMRKPT

Best Arabidopsis Sequence Match ( AT3G02530.1 )
(BLAST)

001: MSVRVLNPNA EVLNKSAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPQEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVQKIIEL KNKVCAGNDN SFVILNQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDCLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLINEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNIV GLDLQDGEPV DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT

Arabidopsis Description

CCT6AT-complex protein 1 subunit zeta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.