Factsheet for Os05t0147400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97762	Sorghum	cytosol	96.45	96.45
Zm00001d007192_P001	Maize	cytosol	96.45	95.73
GSMUA_Achr1P14710_001	Banana	cytosol	93.64	93.64
GSMUA_Achr4P16540_001	Banana	cytosol	92.52	92.52
TraesCS6A01G399300.1	Wheat	golgi	91.96	91.96
TraesCS6D01G383500.1	Wheat	unclear	91.78	91.78
VIT_14s0006g03200.t01	Wine grape	cytosol	91.4	91.4
Solyc02g063090.2.1	Tomato	nucleus, unclear	90.28	90.28
PGSC0003DMT400062134	Potato	cytosol	90.28	90.28
Solyc02g085790.2.1	Tomato	extracellular	89.53	89.53
PGSC0003DMT400033011	Potato	cytosol	89.16	89.16
KRH01781	Soybean	nucleus	88.78	88.78
AT3G02530.1	Thale cress	cytosol	88.6	88.6
Bra040591.1-P	Field mustard	cytosol	88.6	88.6
AT5G16070.1	Thale cress	cytosol	88.41	88.41
KRH46911	Soybean	endoplasmic reticulum	88.41	88.41
CDY28697	Canola	cytosol	88.41	88.41
CDY51544	Canola	cytosol	88.41	88.41
CDX69477	Canola	cytosol	88.22	88.06
CDY26490	Canola	cytosol	88.22	88.06
Bra008652.1-P	Field mustard	cytosol	88.22	88.06
CDX70671	Canola	cytosol	88.04	88.04
CDX78670	Canola	cytosol	88.04	88.04
Bra006338.1-P	Field mustard	cytosol	73.83	87.0
HORVU6Hr1G091690.4	Barley	cytosol, plastid	91.78	86.14
Os03t0619400-01	Rice	plasma membrane	28.6	29.14
Os06t0562600-01	Rice	cytosol, extracellular, plasma membrane	27.29	27.29
Os05t0556700-01	Rice	cytosol, plasma membrane	16.45	26.83
Os02t0332200-01	Rice	plasma membrane	26.17	26.22
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	26.54	26.05
Os10t0514600-01	Rice	plasma membrane	25.98	25.69
Os06t0538000-01	Rice	cytosol, plasma membrane, plastid	26.54	25.45
Os02t0247200-01	Rice	cytosol	26.36	25.22
Os03t0804800-01	Rice	cytosol, extracellular, plasma membrane, plastid	24.67	24.18
Os06t0687700-01	Rice	plasma membrane	12.9	22.85

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.6	Gene3D:3.50.7.10	EntrezGene:4337802	ProteinID:AAT93971.1	ProteinID:BAF16555.1
ProteinID:BAS92256.1	InterPro:Chap_CCT_zeta	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	ProteinID:EEE62321.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005832	GO:GO:0006457
GO:GO:0006458	GO:GO:0008150	GO:GO:0009987	GO:GO:0044183	GO:GO:0051082	GO:GO:0061077
InterPro:GROEL-like_equatorial_sf	EMBL:GU120330	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
EnsemblPlantsGene:Os05g0147400	EnsemblPlants:Os05t0147400-01	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751
PANTHER:PTHR11353	PANTHER:PTHR11353:SF21	UniProt:Q6ASR1	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02347	UniParc:UPI00004036A2	RefSeq:XP_015639798.1	SEG:seg	:

Description

Similar to T-complex protein 1, zeta subunit (TCP-1-zeta) (CCT-zeta) (CCT-zeta-1) (Tcp20) (HTR3) (Acute morphine dependence related protein 2). (Os05t0147400-01);Similar to T-complex protein 1 subunit zeta. (Os05t0147400-02)

Coordinates

chr5:-:2718835..2723389

Molecular Weight (calculated)

59236.8 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.238

Length

535 amino acids

Sequence
(BLAST)

001: MSLRVLNPNA EVLNKSAALH MNINAAKGLQ DVLKTNLGPK GTIKMLVGGA GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDTSGDG TTSTVLFIGE
101: LMKQSERCID EGTHPRFLVD GFDVAKRATL EFLEKFKTSV VMGDEPDREI LKMIARTTLR TKLYEGLADQ LTDIVVNAVL CIRKPDEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CYILTCNVSL EYEKSEINAG FFYSNAEQRE KMVAAERRQV DERVKRIIEL KNKVCAGNDK NFVVINQKGI
301: DPPSLDLLAR AGIIGLRRAK RRNMERLVLA CGGEAVDSVD DLTEDCLGWA GLVYEHTLGE EKYTFIENVK NPRSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTVEDEAV VLGAGAFEVA AKKHLIDNVK KTVKGRAQLG VEAFADALLV IPKTLAENSG LDTQDVIVSL QNEHDRGLVV GLNHHSGEPI DPQMEGIFDN
501: YSVKRQIINS GPIIASQLLL VDEVIRAGRN MRKPT

Best Arabidopsis Sequence Match ( AT3G02530.1 )
(BLAST)

001: MSVRVLNPNA EVLNKSAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPQEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVQKIIEL KNKVCAGNDN SFVILNQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDCLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLINEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNIV GLDLQDGEPV DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT

Arabidopsis Description

CCT6AT-complex protein 1 subunit zeta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.