Factsheet for HORVU6Hr1G091690.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G399300.1	Wheat	golgi	93.16	99.25
TraesCS6D01G383500.1	Wheat	unclear	92.98	99.07
Os05t0147400-01	Rice	cytosol, plasma membrane, plastid	86.14	91.78
EER97762	Sorghum	cytosol	84.74	90.28
Zm00001d007192_P001	Maize	cytosol	85.26	90.17
GSMUA_Achr1P14710_001	Banana	cytosol	83.51	88.97
Solyc02g063090.2.1	Tomato	nucleus, unclear	82.81	88.22
GSMUA_Achr4P16540_001	Banana	cytosol	82.81	88.22
PGSC0003DMT400062134	Potato	cytosol	82.63	88.04
VIT_14s0006g03200.t01	Wine grape	cytosol	82.11	87.48
Solyc02g085790.2.1	Tomato	extracellular	81.4	86.73
PGSC0003DMT400033011	Potato	cytosol	81.23	86.54
AT3G02530.1	Thale cress	cytosol	80.7	85.98
CDY51544	Canola	cytosol	80.0	85.23
CDY28697	Canola	cytosol	80.0	85.23
CDX78670	Canola	cytosol	80.0	85.23
CDX70671	Canola	cytosol	80.0	85.23
Bra040591.1-P	Field mustard	cytosol	80.0	85.23
CDY26490	Canola	cytosol	80.0	85.07
CDX69477	Canola	cytosol	80.0	85.07
Bra008652.1-P	Field mustard	cytosol	80.0	85.07
Bra006338.1-P	Field mustard	cytosol	67.54	84.8
AT5G16070.1	Thale cress	cytosol	79.47	84.67
KRH46911	Soybean	endoplasmic reticulum	79.47	84.67
KRH01781	Soybean	nucleus	79.47	84.67
HORVU5Hr1G085530.1	Barley	mitochondrion	26.67	27.69
HORVU7Hr1G088080.1	Barley	cytosol	25.96	27.51
HORVU4Hr1G068820.1	Barley	cytosol	26.49	26.96
HORVU7Hr1G034140.1	Barley	plasma membrane	24.21	25.84
HORVU6Hr1G025270.1	Barley	cytosol	24.56	25.13
HORVU1Hr1G054530.14	Barley	cytosol	12.98	25.08
HORVU7Hr1G080310.1	Barley	cytosol	24.39	24.91
HORVU1Hr1G052730.26	Barley	cytosol	16.49	24.23
HORVU7Hr1G044070.2	Barley	cytosol	23.68	23.64
HORVU4Hr1G040660.1	Barley	cytosol	22.11	23.33

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.6	Gene3D:3.50.7.10	UniProt:A0A287V735	InterPro:Chap_CCT_zeta	InterPro:Chaperone_TCP-1
InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU6Hr1G091690
EnsemblPlants:HORVU6Hr1G091690.4	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00304
ScanProsite:PS00750	ScanProsite:PS00751	PANTHER:PTHR11353	PANTHER:PTHR11353:SF21	SUPFAM:SSF48592	SUPFAM:SSF52029
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02347	UniParc:UPI000B476C86	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:576402978..576408613

Molecular Weight (calculated)

62729.1 Da

IEP (calculated)

7.091

GRAVY (calculated)

-0.201

Length

570 amino acids

Sequence
(BLAST)

001: QVPKPYSFRI LPSSPDSHSL PAVSPIRRRP AAAAAMSIRM LNQNAEVMNK SAALAMNIGA AKGLQDVLKT NLGPKGTIKM LVGGAGDIKL TKDGNTLLKE
101: MQIQNPTAIM IARTAVAQDD TSGDGTTSTV LFIGELMKMS ERCIEEGTHP RFLVDGFEVA KKATLEFLET FKTSVVIGDQ PDREILKMVA RTTLRTKLYE
201: GLADQLTDIV VNAVLCIRQS DQPIDLFMVE IMHMRHKFDV DTRLIEGLVL DHGSRHPDMK RRAENCYILT ANVSLEYEKS EINAGFFYSN AEQREKMVTA
301: ERRQVDERVQ KIIELKNKVC AGTDKNFVVI NQKGIDPPSL DLLARAGIIA LRRAKRRNME RLVLACGGEA INSVEGMTEE CLGWAGLVYE HVLGEEKYTF
401: VENVKNPHSC TILIKGPNDH TIAQIKDAVR DGLRSVKNTV EDEAVVLGAG AFEIAARKNL IDNVKKTVKG RAQLGVGAFA DALLVIPKTL AENSGLDTQD
501: VIVSLENEHD RGLVVGLNHN TGEPVDPEME GIYDNYSVKR QIVNSGPIIA SQLLLVDEVI RAGRNMRKPT

Best Arabidopsis Sequence Match ( AT3G02530.1 )
(BLAST)

001: MSVRVLNPNA EVLNKSAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPQEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVQKIIEL KNKVCAGNDN SFVILNQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDCLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLINEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNIV GLDLQDGEPV DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT

Arabidopsis Description

CCT6AT-complex protein 1 subunit zeta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.