Factsheet for HORVU7Hr1G080310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G346200.1	Wheat	cytosol	99.28	99.28
TraesCS7B01G237000.1	Wheat	cytosol	99.46	98.23
TraesCS7D01G332900.1	Wheat	cytosol	99.1	97.88
Zm00001d028183_P002	Maize	cytosol	93.37	93.37
EER92655	Sorghum	cytosol	92.83	92.83
Os06t0538000-01	Rice	cytosol, plasma membrane, plastid	92.47	92.47
GSMUA_Achr6P23290_001	Banana	cytosol	87.1	87.25
VIT_17s0000g08170.t01	Wine grape	cytosol	86.74	86.89
Bra001174.1-P	Field mustard	cytosol	85.48	85.95
CDX74120	Canola	cytosol	85.48	85.95
VIT_07s0130g00410.t01	Wine grape	cytosol	85.66	85.82
GSMUA_Achr5P09040_001	Banana	cytosol	85.3	85.46
AT5G26360.1	Thale cress	cytosol	84.95	85.41
CDY18835	Canola	cytosol	84.77	85.23
Bra040242.1-P	Field mustard	cytosol	84.77	85.23
PGSC0003DMT400060294	Potato	cytosol	84.41	84.86
Solyc05g056310.2.1	Tomato	extracellular, plastid	84.23	84.38
KRH09301	Soybean	cytosol, endoplasmic reticulum, nucleus	83.69	84.3
CDY49990	Canola	cytosol	85.3	84.1
KRH38791	Soybean	cytosol	83.33	83.94
KRG92501	Soybean	cytosol	83.33	83.48
Zm00001d053553_P002	Maize	cytosol	92.11	78.83
HORVU7Hr1G088080.1	Barley	cytosol	30.82	31.97
HORVU7Hr1G034140.1	Barley	plasma membrane	27.78	29.03
HORVU6Hr1G025270.1	Barley	cytosol	28.14	28.19
HORVU1Hr1G054530.14	Barley	cytosol	14.34	27.12
HORVU4Hr1G040660.1	Barley	cytosol	26.16	27.04
HORVU5Hr1G085530.1	Barley	mitochondrion	26.34	26.78
HORVU7Hr1G044070.2	Barley	cytosol	26.88	26.27
HORVU4Hr1G068820.1	Barley	cytosol	26.16	26.07
HORVU1Hr1G052730.26	Barley	cytosol	17.03	24.48
HORVU6Hr1G091690.4	Barley	cytosol, plastid	24.91	24.39

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.3	Gene3D:3.30.260.10	Gene3D:3.50.7.10	InterPro:Chap_CCT_gamma	InterPro:Chaperone_TCP-1
InterPro:Chaperonin_TCP-1_CS	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
EnsemblPlantsGene:HORVU7Hr1G080310	EnsemblPlants:HORVU7Hr1G080310.1	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M0X690
PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353
PANTHER:PTHR11353:SF24	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02344
UniParc:UPI0002963970	SEG:seg	:	:	:	:

Description

T-complex protein 1 subunit gamma [Source:UniProtKB/TrEMBL;Acc:M0X690]

Coordinates

chrchr7H:-:474788777..474794705

Molecular Weight (calculated)

61004.1 Da

IEP (calculated)

6.531

GRAVY (calculated)

-0.186

Length

558 amino acids

Sequence
(BLAST)

001: MALHAPVLVL KDSLKRESGA KVQHGNIHAA KAVSDIIRTT LGPRSMLKML LDASGGIVVT NDGNAILREL DIAHPAAKSM IELSRTQDEE VGDGTTSVIV
101: LAGEMLHVAE TFIEKNYHPT VICRAYSRAL EDAIAVLDKI AMPVNVNDRE AMLGLVKSSI GTKFTGQFGD LIADLAIDAT TTAGVDLGQG MREVDIKKYI
201: KVEKIPGGQL EDSKVLKGVM FNKDVVAPGK MRRKIVNPRI ILLDCPVEYK KGENQTNAEL MSEEDWKVLL DMEEEYIKNL CVQILKFKPD LVITEKGLSD
301: MAMHYLSKAG VSAIRRLRKT DNNRIAKACG AVIVNRPEEL QESDVGTRAG LFEVKKIGDE FFSFIIECKD PKACTVLLRG ASKDILNEVE RNLQDAMSVA
401: RNILKNPKLL PGGGASELTV SATLKQKSSS VEGVEKWPYE AAALAFEAIP RTLLQNCGLN VIRTMTQLQG KHANGENPWV GVDGRTGDIV DMKERKIWDS
501: YSVKAQTFKT AIESACMLLR IDDIVSGIKK KQAPGAGAPK QPQIETGEDA DTEQMIPE

Best Arabidopsis Sequence Match ( AT5G26360.1 )
(BLAST)

001: MHAPVLVLSD SLKRESGSKV HHGNIQASKA VADIIRTTLG PRSMLKMLLD AGGGIVVTND GNAILRELDV AHPAAKSMIE LSRTQDEEVG DGTTSVIVLA
101: GEMLHVAEAF LEKNYHPTVI CRAYIKALED SIAVLDKIAM SIDINDRSQV LGLVKSCIGT KFTSQFGDLI ADLAIDATTT VGVDLGQGLR EVDIKKYIKV
201: EKVPGGQFED SEVLKGVMFN KDVVAPGKMK RKIVNPRIIL LDCPLEYKKG ENQTNAELVR EEDWEVLLKL EEEYIENICV QILKFKPDLV ITEKGLSDLA
301: CHYFSKAGVS AIRRLRKTDN NRIAKACGAV IVNRPDELQE SDIGTGAGLF EVKKIGDDFF SFIVDCKEPK ACTVLLRGPS KDFINEVERN LQDAMSVARN
401: IIKNPKLVPG GGATELTVSA TLKQKSATIE GIEKWPYEAA AIAFEAIPRT LAQNCGVNVI RTMTALQGKH ANGENAWTGI DGNTGAIADM KESKIWDSYN
501: VKAQTFKTAI EAACMLLRID DIVSGIKKKQ APGSGPSKPT IETEGDADNE QILPD

Arabidopsis Description

CCT3T-complex protein 1 subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A178UHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.