Factsheet for TraesCS7D01G332900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G237000.1	Wheat	cytosol	99.65	99.65
TraesCS7A01G346200.1	Wheat	cytosol	98.23	99.46
HORVU7Hr1G080310.1	Barley	cytosol	97.88	99.1
Zm00001d028183_P002	Maize	cytosol	92.21	93.37
EER92655	Sorghum	cytosol	91.68	92.83
Os06t0538000-01	Rice	cytosol, plasma membrane, plastid	91.33	92.47
GSMUA_Achr6P23290_001	Banana	cytosol	85.84	87.07
VIT_17s0000g08170.t01	Wine grape	cytosol	85.49	86.71
Bra001174.1-P	Field mustard	cytosol	84.25	85.77
AT5G26360.1	Thale cress	cytosol	84.25	85.77
CDX74120	Canola	cytosol	84.25	85.77
VIT_07s0130g00410.t01	Wine grape	cytosol	84.42	85.64
GSMUA_Achr5P09040_001	Banana	cytosol	84.07	85.28
CDY18835	Canola	cytosol	83.54	85.05
Bra040242.1-P	Field mustard	cytosol	83.54	85.05
PGSC0003DMT400060294	Potato	cytosol	83.36	84.86
Solyc05g056310.2.1	Tomato	extracellular, plastid	83.19	84.38
KRH09301	Soybean	cytosol, endoplasmic reticulum, nucleus	82.3	83.94
KRH38791	Soybean	cytosol	82.3	83.94
CDY49990	Canola	cytosol	84.07	83.92
KRG92501	Soybean	cytosol	82.3	83.48
Zm00001d053553_P002	Maize	cytosol	90.97	78.83
TraesCS7D01G364400.2	Wheat	cytosol	30.62	32.34
TraesCS1D01G216600.1	Wheat	cytosol	29.03	30.65
TraesCS7D01G056800.1	Wheat	cytosol	28.14	29.17
TraesCS6D01G121300.1	Wheat	cytosol	28.14	28.55
TraesCS1D01G208500.1	Wheat	cytosol	24.96	28.31
TraesCS7D01G164400.1	Wheat	cytosol	26.73	28.28
TraesCS5D01G347400.1	Wheat	cytosol	26.19	28.03
TraesCS4D01G250100.1	Wheat	cytosol	24.78	28.0
TraesCS7D01G218500.2	Wheat	cytosol	27.79	27.5
TraesCS4D01G157300.1	Wheat	cytosol	25.84	27.19
TraesCS6D01G008000.1	Wheat	cytosol	26.37	26.14
TraesCS6D01G383500.1	Wheat	unclear	24.25	25.61

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.3	Gene3D:3.30.260.10	Gene3D:3.50.7.10	InterPro:Chap_CCT_gamma	InterPro:Chaperone_TCP-1
InterPro:Chaperonin_TCP-1_CS	ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118
PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF24
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02344	EnsemblPlantsGene:TraesCS7D01G332900
EnsemblPlants:TraesCS7D01G332900.1	TIGR:cd03337	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:+:424091156..424096654

Molecular Weight (calculated)

61732.0 Da

IEP (calculated)

5.791

GRAVY (calculated)

-0.168

Length

565 amino acids

Sequence
(BLAST)

001: MALHAPVLVL KDSLKRESGA KVQHGNIQAA KAVSDIIRTT LGPRSMLKML LDASGGIVVT NDGNAILREL DIAHPAAKSM IELSRTQDEE VGDGTTSVIV
101: LAGEMLHVAE TFIEKNYHPT VICRAYSRAL EDAIAVLDKI AMPVDVNDLG MYHDVGEAML GLVKSSIGTK FTGQFGDLIA DLAIDATTTA GVDLGQGMRE
201: VDIKKYIKVE KIPGGQLEDS MVLKGVMFNK DVVAPGKMRR KIVNPRIILL DCPVEYKKGE NQTNAELMSE EDWKVLLDME EEYIKNLCVQ ILKFKPDLVI
301: TEKGLSDMAM HYLSKAGVSA IRRLRKTDNN RIAKACGAVI VNRPEELQES DVGTRAGLFE VKKIGDEFFS FIIECKDPKA CTVLLRGASK DILNEVERNL
401: QDAMSVARNI LKNPKLLPGG GASELTVSAT LKQKSSSVEG VEKWPYEAAA LAFEAIPRTL LQNCGLNVIR TMTQLQGKHA NGENPWVGVD GRTGDIVDMK
501: ERKIWDSYSV KAQTFKTAIE SACMLLRIDD IVSGIKKKQA PGSGAPKQPQ IETGEDADTE QMIPE

Best Arabidopsis Sequence Match ( AT5G26360.1 )
(BLAST)

001: MHAPVLVLSD SLKRESGSKV HHGNIQASKA VADIIRTTLG PRSMLKMLLD AGGGIVVTND GNAILRELDV AHPAAKSMIE LSRTQDEEVG DGTTSVIVLA
101: GEMLHVAEAF LEKNYHPTVI CRAYIKALED SIAVLDKIAM SIDINDRSQV LGLVKSCIGT KFTSQFGDLI ADLAIDATTT VGVDLGQGLR EVDIKKYIKV
201: EKVPGGQFED SEVLKGVMFN KDVVAPGKMK RKIVNPRIIL LDCPLEYKKG ENQTNAELVR EEDWEVLLKL EEEYIENICV QILKFKPDLV ITEKGLSDLA
301: CHYFSKAGVS AIRRLRKTDN NRIAKACGAV IVNRPDELQE SDIGTGAGLF EVKKIGDDFF SFIVDCKEPK ACTVLLRGPS KDFINEVERN LQDAMSVARN
401: IIKNPKLVPG GGATELTVSA TLKQKSATIE GIEKWPYEAA AIAFEAIPRT LAQNCGVNVI RTMTALQGKH ANGENAWTGI DGNTGAIADM KESKIWDSYN
501: VKAQTFKTAI EAACMLLRID DIVSGIKKKQ APGSGPSKPT IETEGDADNE QILPD

Arabidopsis Description

CCT3T-complex protein 1 subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A178UHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.