Factsheet for TraesCS7D01G218500.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G124100.1	Wheat	cytosol, golgi, unclear	95.1	99.63
TraesCS7A01G217200.1	Wheat	cytosol	94.4	98.9
TraesCS7D01G056800.1	Wheat	cytosol	93.87	98.35
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	88.62	92.84
Zm00001d052056_P005	Maize	plasma membrane	87.04	91.19
EES05938	Sorghum	cytosol	87.04	91.19
TraesCS1D01G208500.1	Wheat	cytosol	79.51	91.16
Zm00001d018349_P001	Maize	cytosol	86.51	90.64
HORVU7Hr1G044070.2	Barley	cytosol	88.09	88.09
VIT_15s0021g02230.t01	Wine grape	cytosol	83.19	87.0
KRH59103	Soybean	nucleus	82.84	86.79
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	82.84	86.79
Solyc01g090750.2.1	Tomato	nucleus	82.49	86.42
PGSC0003DMT400066954	Potato	cytosol	82.31	86.24
AT3G20050.1	Thale cress	cytosol	81.61	85.5
CDY25374	Canola	cytosol	81.26	85.14
CDY42227	Canola	cytosol	81.09	84.95
CDY24564	Canola	cytosol	81.09	84.95
CDY36063	Canola	cytosol	79.68	83.49
CDX82264	Canola	cytosol	79.68	83.49
Bra001773.1-P	Field mustard	cytosol	79.68	83.33
Bra035820.1-P	Field mustard	cytosol	81.09	83.27
CDY33444	Canola	cytosol	80.91	82.06
GSMUA_Achr2P01100_001	Banana	cytosol, extracellular	38.53	80.29
Bra038252.1-P	Field mustard	cytosol	81.09	60.84
TraesCS4D01G250100.1	Wheat	cytosol	32.22	36.8
TraesCS5D01G347400.1	Wheat	cytosol	33.45	36.17
TraesCS6D01G121300.1	Wheat	cytosol	33.27	34.11
TraesCS1D01G216600.1	Wheat	cytosol	30.3	32.34
TraesCS7D01G364400.2	Wheat	cytosol	29.6	31.59
TraesCS7D01G164400.1	Wheat	cytosol	28.55	30.52
TraesCS7D01G332900.1	Wheat	cytosol	27.5	27.79
TraesCS6D01G383500.1	Wheat	unclear	24.87	26.54
TraesCS4D01G157300.1	Wheat	cytosol	24.87	26.44
TraesCS6D01G008000.1	Wheat	cytosol	25.04	25.09

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10	InterPro:Chap_CCT_alpha	InterPro:Chaperone_TCP-1
InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00304
ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF177	SUPFAM:SSF48592
SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	EnsemblPlantsGene:TraesCS7D01G218500	EnsemblPlants:TraesCS7D01G218500.2	TIGR:cd03335
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:179182461..179187832

Molecular Weight (calculated)

62151.0 Da

IEP (calculated)

6.130

GRAVY (calculated)

-0.088

Length

571 amino acids

Sequence
(BLAST)

001: MAITAQVPDI MGERQSGQDV RTQNVSACQA VANIVKSSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIIA
101: AELLKRANEL VRNKIHPTSI ISGYRLAMRE ACKYVEEKLS VKVDKLGKDS LINCAKTSMS SKLITTDDNF FANLVVEAVQ AVKTTNSKGE VKYPIKSINI
201: LKAHGKSAKE SYLLNGYALN TGRAAQGMPT RVTPARIACL DFNLQKTKMQ MGVQVLVSDP RELEKIRERE SDITKERIEK VLKAGANVVF TTKGIDDMSL
301: KYFVEAGAIA VRRVRKEDLR HVAKATGATM VTTFADMEGE ETFDPSFLGH ADEVVEERIS DDEIILVKGT KNTSAVSIIL RGANDFMLDE IERSLHDALC
401: IVKRTLESNT YLHISSAISH NSASIRSSFL VGEYSSVVAG GGAVETALSV YLENLATTLG SREQLAIAEF AESLLIIPKV LAVNAAKDAT DLVAKLRSCH
501: HKAQTNADKQ HLSSMGLDLT KGVIRNNLEH GVIEPAMSKV KIIQFATEAA ITIVRIDDMI KLDKEESGQE E

Best Arabidopsis Sequence Match ( AT3G11830.1 )
(BLAST)

001: MASMMQPQII LLKEGTDTSQ GKAQLVSNIN ACTAVGDVVR TTLGPRGMDK LIHDDKGSVT ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV
101: VLLAAEFLKE AKPFIEDGVH AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDAVMAIG NDDRLNLIGI
201: KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301: LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR
401: RAVKNSTVVP GGGAIDMEIS KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS YGVDINTGGI ADSFANFVWE
501: PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG AMGRGRGGGR GRGMRRR

Arabidopsis Description

CCT7T-complex protein 1 subunit eta [Source:UniProtKB/Swiss-Prot;Acc:Q9SF16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.