Factsheet for Bra035820.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25374	Canola	cytosol	97.66	99.63
CDY24564	Canola	cytosol	97.3	99.27
AT3G20050.1	Thale cress	cytosol	95.68	97.61
Bra001773.1-P	Field mustard	cytosol	95.14	96.89
KRH59103	Soybean	nucleus	87.41	89.17
VIT_15s0021g02230.t01	Wine grape	cytosol	87.41	89.01
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	87.23	88.99
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	85.25	86.97
GSMUA_Achr11P...	Banana	cytosol	85.79	86.41
Zm00001d052056_P005	Maize	plasma membrane	84.35	86.06
Solyc01g090750.2.1	Tomato	nucleus	83.99	85.69
PGSC0003DMT400066954	Potato	cytosol	83.99	85.69
Zm00001d018349_P001	Maize	cytosol	83.81	85.5
EES05938	Sorghum	cytosol	83.81	85.5
TraesCS7B01G124100.1	Wheat	cytosol, golgi, unclear	83.45	85.14
TraesCS7A01G217200.1	Wheat	cytosol	83.09	84.77
TraesCS1D01G208500.1	Wheat	cytosol	75.9	84.74
TraesCS7D01G056800.1	Wheat	cytosol	82.73	84.4
TraesCS7A01G062100.1	Wheat	cytosol	82.73	84.4
TraesCS4A01G427500.1	Wheat	cytosol, unclear	82.73	84.4
TraesCS1A01G205200.1	Wheat	cytosol	82.55	84.22
HORVU1Hr1G052730.26	Barley	cytosol	58.63	84.02
TraesCS1B01G218800.1	Wheat	cytosol	71.04	83.69
TraesCS7D01G218500.2	Wheat	cytosol	83.27	81.09
GSMUA_Achr2P01090_001	Banana	cytosol	50.18	77.29
HORVU7Hr1G044070.2	Barley	cytosol	78.96	76.88
Bra038252.1-P	Field mustard	cytosol	96.76	70.7
Bra020134.1-P	Field mustard	cytosol	31.83	34.91
Bra034807.1-P	Field mustard	cytosol	33.09	34.65
Bra002337.1-P	Field mustard	cytosol	32.55	34.35
Bra038682.1-P	Field mustard	cytosol	33.63	33.69
Bra001423.1-P	Field mustard	cytosol	33.81	33.57
Bra021300.1-P	Field mustard	cytosol	31.83	33.33
Bra022292.1-P	Field mustard	cytosol, plastid	31.83	33.21
Bra012506.1-P	Field mustard	cytosol	30.4	31.59
Bra010965.1-P	Field mustard	cytosol	30.04	31.21
Bra032797.1-P	Field mustard	cytosol	30.04	31.21
Bra001174.1-P	Field mustard	cytosol	28.96	29.01
Bra040242.1-P	Field mustard	cytosol	28.42	28.47
Bra036422.1-P	Field mustard	cytosol	26.98	27.57
Bra001094.1-P	Field mustard	cytosol	27.16	27.55
Bra031959.1-P	Field mustard	cytosol	26.8	27.39
Bra040591.1-P	Field mustard	cytosol	25.72	26.73
Bra008652.1-P	Field mustard	cytosol	25.72	26.68
Bra035423.1-P	Field mustard	cytosol	10.61	26.34
Bra006338.1-P	Field mustard	cytosol	20.86	25.55
Bra006584.1-P	Field mustard	cytosol	32.73	24.33

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10	EnsemblPlantsGene:Bra035820	EnsemblPlants:Bra035820.1
EnsemblPlants:Bra035820.1-P	InterPro:Chap_CCT_alpha	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	UniProt:M4F420
PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF177
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02340	UniParc:UPI0002547BE8

Description

AT3G20050 (E=7e-295) ATTCP-1 | ATTCP-1; ATP binding / protein binding / unfolded protein binding

Coordinates

chrA05:+:17383448..17386955

Molecular Weight (calculated)

60303.2 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.059

Length

556 amino acids

Sequence
(BLAST)

001: MSISAQNPDI SGERQSGQDV RTQNPPKLSL FLMACQAVSN IVKNSLGPVG LDKGCTLMLV DDIGDVTITN DGATILRMLE VEHPAAKVLV ELAELQDREV
101: GDGTTSVVIV AAELLKRAND LVRNKIHPTS IISGYRLAMR EACKYIEEKL VTKVEKLGKA PLINCAKTSM SSKLISGDSD FFANLVVDAV LSVKMTNQRG
201: EIKYPIKGIN ILKAHGQSAK DSYLLNGYAL NTGRAAQGMP LRVSPAKIAC LDFNLQKTKM QLGVQVVVND PRELEKIRQR EADMTKERIE KLLKAGANVI
301: LTTKGIDDMA LKYFVEAGAI AVRRVRKEDM RHVAKATGAT LVTTFADMEG EETFDPAHLG SADEVVEERI ADDDVVLIKG TKTSSAVSLI LRGANDYMLD
401: EMERALHDSL CIVKRTLESN TVVAGGGAVE SALSVYLEHL ATTLGSREQL AIAEFADALL IIPKVLAVNA AKDATELVAK LRAYHHTAQT KADKKHYSSM
501: GLDLVNGTIR NNLEAGVIEP AMSKVKIIQF ATEAAITILR IDDMIKLVKE DGQGDE

Best Arabidopsis Sequence Match ( AT3G20050.1 )
(BLAST)

001: MSISAQNPDI SGDRQSGQDV RTQNVMACQA VSNIVKTSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIVA
101: AELLKRANDL VRNKIHPTSI ISGYRLAMRE SCKYIEEKLV TKVEKLGKVP LINCAKTSMS SKLISGDSDF FANLVVEAVL SVKMTNQRGE IKYPIKGINI
201: LKAHGQSARD SYLLNGYALN TGRAAQGMPL RVSPAKIACL DFNLQKTKMQ LGVQVVVNDP RELEKIRQRE ADMTKERIEK LLKAGANVIL TTKGIDDMAL
301: KYFVEAGAIA VRRVRKEDMR HVAKATGATL VTTFADMEGE ETFDPAHLGS ADEVVEERIA DDDVILIKGT KTSSAVSLIL RGANDYMLDE MERALHDALC
401: IVKRTLESNT VVAGGGAVES ALSVYLEHLA TTLGSREQLA IAEFADALLI IPKVLAVNAA KDATELVAKL RAYHHTAQTK ADKKHYSSMG LDLVNGTIRN
501: NLEAGVIEPA MSKVKIIQFA TEAAITILRI DDMIKLVKDE SQGEE

Arabidopsis Description

CCT1T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P28769]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.