Factsheet for HORVU1Hr1G052730.26

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P01100_001	Banana	cytosol, extracellular	58.76	83.21
TraesCS1D01G208500.1	Wheat	cytosol	96.39	75.1
TraesCS1A01G205200.1	Wheat	cytosol	95.62	68.07
Zm00001d052056_P005	Maize	plasma membrane	94.59	67.34
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	94.33	67.16
EES05938	Sorghum	cytosol	93.56	66.61
Zm00001d018349_P001	Maize	cytosol	93.04	66.24
TraesCS1B01G218800.1	Wheat	cytosol	75.77	62.29
HORVU7Hr1G044070.2	Barley	cytosol	91.24	62.0
VIT_15s0021g02230.t01	Wine grape	cytosol	86.6	61.54
AT3G20050.1	Thale cress	cytosol	85.05	60.55
KRH59103	Soybean	nucleus	84.28	60.0
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	84.28	60.0
CDY25374	Canola	cytosol	84.02	59.82
CDY24564	Canola	cytosol	84.02	59.82
CDY42227	Canola	cytosol	83.76	59.63
CDX82264	Canola	cytosol	83.76	59.63
Bra001773.1-P	Field mustard	cytosol	83.76	59.52
CDY36063	Canola	cytosol	83.51	59.45
Solyc01g090750.2.1	Tomato	nucleus	82.73	58.9
PGSC0003DMT400066954	Potato	cytosol	82.47	58.72
Bra035820.1-P	Field mustard	cytosol	84.02	58.63
CDY33444	Canola	cytosol	83.51	57.55
Bra038252.1-P	Field mustard	cytosol	83.76	42.71
HORVU1Hr1G054530.14	Barley	cytosol	19.59	25.76
HORVU5Hr1G085530.1	Barley	mitochondrion	30.67	21.68
HORVU4Hr1G068820.1	Barley	cytosol	30.67	21.25
HORVU6Hr1G025270.1	Barley	cytosol	29.9	20.83
HORVU7Hr1G034140.1	Barley	plasma membrane	25.77	18.73
HORVU4Hr1G040660.1	Barley	cytosol	25.0	17.96
HORVU7Hr1G088080.1	Barley	cytosol	24.23	17.47
HORVU7Hr1G080310.1	Barley	cytosol	24.48	17.03
HORVU6Hr1G091690.4	Barley	cytosol, plastid	24.23	16.49

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10	UniProt:A0A287FL37	InterPro:Chaperone_TCP-1
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:GROEL-like_equatorial_sf
InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU1Hr1G052730	EnsemblPlants:HORVU1Hr1G052730.26	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413
PFAM:PF00118	PRINTS:PR00304	PANTHER:PTHR11353	PANTHER:PTHR11353:SF177	SUPFAM:SSF48592	SUPFAM:SSF52029
InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B471A9F	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:390638695..390645024

Molecular Weight (calculated)

42461.4 Da

IEP (calculated)

6.968

GRAVY (calculated)

-0.084

Length

388 amino acids

Sequence
(BLAST)

001: MSSKLIHSDR DFFANLVVEA VQAVKTTNAK GAVKYPIKSI NILKAHGKSA KESYMLNGYA LNTGRAAQGM PTKVTAAKIA CFDFNLQKTK MQMGVQVLVS
101: DPRELEKIRQ RESDITKERI EKILKAGANV VLTTKGIDDM SLKYFVEAGA IAVRRVRKED LRHVAKATGA TMVSTFADME GEETFDPSFL GHADEVVEER
201: IADDDVILVK GTKNTSVVSV ILRGANDYML DEIERSLHDA LCIVKRTLES NMVVVAGGGA VEAALSVYLE NLATTLGSRE QLAIAEFAES LLIIPKVLSV
301: NAAKDATELV AKLRAYHHTA QTKADKQHYS SMGLDLVKGI VRNNLEYGVI EPAMSKVKII QFATEAAITI VRIDDMIKLT KEESGNEE

Best Arabidopsis Sequence Match ( AT3G11830.1 )
(BLAST)

001: MASMMQPQII LLKEGTDTSQ GKAQLVSNIN ACTAVGDVVR TTLGPRGMDK LIHDDKGSVT ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV
101: VLLAAEFLKE AKPFIEDGVH AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDAVMAIG NDDRLNLIGI
201: KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301: LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR
401: RAVKNSTVVP GGGAIDMEIS KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS YGVDINTGGI ADSFANFVWE
501: PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG AMGRGRGGGR GRGMRRR

Arabidopsis Description

CCT7T-complex protein 1 subunit eta [Source:UniProtKB/Swiss-Prot;Acc:Q9SF16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.