Factsheet for HORVU1Hr1G054530.14

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G068820.1
HORVU5Hr1G085530.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24510.1	HORVU4Hr1G068820.1	AT5G20890.1	21798944
AT1G24510.1	HORVU5Hr1G085530.1	AT5G20890.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073555	Potato	cytosol	53.9	60.92
GSMUA_Achr6P06770_001	Banana	cytosol	83.05	50.72
TraesCS1D01G216600.1	Wheat	cytosol	88.81	48.97
TraesCS1B01G227600.1	Wheat	cytosol	88.81	48.97
Os06t0562600-01	Rice	cytosol, extracellular, plasma membrane	82.71	45.61
EER88530	Sorghum	cytosol	82.71	45.61
Solyc05g013990.2.1	Tomato	nucleus	82.37	45.42
EER97880	Sorghum	cytosol	82.37	45.42
HORVU7Hr1G088080.1	Barley	cytosol	82.37	45.17
KRH31372	Soybean	nucleus	81.69	45.05
KRG97508	Soybean	cytosol, nucleus	81.36	44.86
GSMUA_AchrUn_...	Banana	cytosol	81.02	44.67
Zm00001d018694_P002	Maize	cytosol	82.71	44.53
Zm00001d007960_P001	Maize	cytosol	82.37	44.34
CDY36138	Canola	cytosol	80.0	44.11
Bra010965.1-P	Field mustard	cytosol	79.66	43.93
CDY54836	Canola	cytosol	79.66	43.93
AT1G24510.1	Thale cress	cytosol	78.98	43.55
CDX84951	Canola	cytosol	78.98	43.55
CDY51593	Canola	cytosol	78.98	43.47
Bra032797.1-P	Field mustard	cytosol	78.64	43.36
CDY03881	Canola	cytosol	78.64	43.36
Bra012506.1-P	Field mustard	cytosol	78.64	43.36
VIT_12s0028g00350.t01	Wine grape	cytosol	78.64	43.36
VIT_01s0137g00250.t01	Wine grape	cytosol	82.71	36.86
TraesCS1A01G213800.1	Wheat	cytosol	44.41	33.16
HORVU1Hr1G052730.26	Barley	cytosol	25.76	19.59
HORVU7Hr1G034140.1	Barley	plasma membrane	29.83	16.48
HORVU5Hr1G085530.1	Barley	mitochondrion	26.78	14.39
HORVU7Hr1G080310.1	Barley	cytosol	27.12	14.34
HORVU4Hr1G068820.1	Barley	cytosol	26.78	14.11
HORVU7Hr1G044070.2	Barley	cytosol	27.12	14.01
HORVU6Hr1G025270.1	Barley	cytosol	25.76	13.64
HORVU6Hr1G091690.4	Barley	cytosol, plastid	25.08	12.98
PGSC0003DMT400027968	Potato	cytosol	9.49	12.79
HORVU4Hr1G040660.1	Barley	cytosol	17.63	9.63

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.50.7.10	MapMan:35.1	UniProt:A0A287FNI7	InterPro:Chap_CCT_epsi	InterPro:Chaperone_TCP-1
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	EnsemblPlantsGene:HORVU1Hr1G054530	EnsemblPlants:HORVU1Hr1G054530.14
InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00304	PANTHER:PTHR11353
PANTHER:PTHR11353:SF178	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	UniParc:UPI000B472B71

Description

No Description!

Coordinates

chrchr1H:-:402793477..402797353

Molecular Weight (calculated)

32579.5 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.029

Length

295 amino acids

Sequence
(BLAST)

001: MLILPSLPAH LSPQSPRQSI RLTLTLEKFQ TLRGQEQKYF DEMVQKCKDV GATLVICQWG FDDEANHLLM QRNLPAVRWV GGVELELIAI ATAGGRIVPR
101: FQELTPDKLG QAGLVREKSF GTTKDRMLYI ERCANSRAVT IFIRGGNKMI IEEAKRSIHD TLCVARNLIH NNSIVYGGGS AEISCSIAVE AAADRYAGAE
201: QYAIRSFADV LDGIPLALAE NSGLPPIDTL TAVKSQQIQE TNPYCGIDCN DVGSNDMRVQ NVFETLIGKQ QQILLATQVV KMILKIDDVI MLSEF

Best Arabidopsis Sequence Match ( AT1G24510.1 )
(BLAST)

001: MALAFDEFGR PFIILREQDQ KTRLRGIDAQ KANIAAGKAV ARILRSSLGP KGMDKMLQGP DGDITITNDG ATILEQMDVD NQIAKLMVEL SRSQDYEIGD
101: GTTGVVVMAG ALLEQAERQL DRGIHPIRIA EGYEMASRVA VEHLERIAQK FEFDVNNYEP LVQTCMTTLS SKIVNRCKRS LAEIAVKAVL AVADLERRDV
201: NLDLIKVEGK VGGKLEDTEL IYGILIDKDM SHPQMPKQIE DAHIAILTCP FEPPKPKTKH KVDIDTVEKF ETLRKQEQQY FDEMVQKCKD VGATLVICQW
301: GFDDEANHLL MHRNLPAVRW VGGVELELIA IATGGRIVPR FQELTPEKLG KAGVVREKSF GTTKERMLYI EHCANSKAVT VFIRGGNKMM IEETKRSIHD
401: ALCVARNLIR NKSIVYGGGA AEIACSLAVD AAADKYPGVE QYAIRAFAEA LDSVPMALAE NSGLQPIETL SAVKSQQIKE NIPFYGIDCN DVGTNDMREQ
501: NVFETLIGKQ QQILLATQVV KMILKIDDVI SNSEY

Arabidopsis Description

CCT5T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:O04450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.