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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54836 Canola cytosol 99.63 99.63
Bra010965.1-P Field mustard cytosol 99.44 99.44
CDY51593 Canola cytosol 98.69 98.51
AT1G24510.1 Thale cress cytosol 98.5 98.5
CDY03881 Canola cytosol 98.32 98.32
CDX84951 Canola cytosol 97.94 97.94
Solyc05g013990.2.1 Tomato nucleus 92.15 92.15
PGSC0003DMT400073555 Potato cytosol 44.86 91.95
KRH31372 Soybean nucleus 90.84 90.84
KRG97508 Soybean cytosol, nucleus 90.65 90.65
GSMUA_Achr6P06770_001 Banana cytosol 81.12 89.86
EER88530 Sorghum cytosol 89.35 89.35
EER97880 Sorghum cytosol 89.35 89.35
Os06t0562600-01 Rice cytosol, extracellular, plasma membrane 88.6 88.6
VIT_12s0028g00350.t01 Wine grape cytosol 88.04 88.04
GSMUA_AchrUn_... Banana cytosol 87.66 87.66
TraesCS7D01G364400.2 Wheat cytosol 87.29 87.29
TraesCS7A01G358400.1 Wheat cytosol, unclear 87.29 87.29
TraesCS7B01G269300.2 Wheat cytosol 87.29 87.29
TraesCS1A01G213800.1 Wheat cytosol 64.3 87.09
HORVU7Hr1G088080.1 Barley cytosol 87.48 86.99
TraesCS1D01G216600.1 Wheat cytosol 86.73 86.73
Zm00001d018694_P002 Maize cytosol 88.78 86.68
Zm00001d007960_P001 Maize cytosol 88.41 86.31
TraesCS1B01G227600.1 Wheat cytosol 86.17 86.17
HORVU1Hr1G054530.14 Barley cytosol 44.11 80.0
VIT_01s0137g00250.t01 Wine grape cytosol 91.22 73.72
CDY72126 Canola cytosol 16.45 41.51
CDY72106 Canola cytosol 16.26 41.04
CDY18509 Canola cytosol 36.45 36.72
CDY11302 Canola cytosol 8.79 36.72
CDY43747 Canola cytosol 8.79 36.72
CDX92212 Canola cytosol, plastid 36.45 36.59
CDY24438 Canola cytosol, plastid 36.26 36.4
CDX95541 Canola cytosol, plastid 36.26 36.33
CDY47913 Canola cytosol 15.89 32.57
CDX70950 Canola cytosol 31.59 32.07
CDY09085 Canola cytosol 31.59 32.07
CDX92428 Canola cytosol 31.21 31.69
CDY16573 Canola cytosol 31.21 31.69
CDY42227 Canola cytosol 31.59 31.01
CDY36063 Canola cytosol 31.59 31.01
CDY24564 Canola cytosol 31.59 31.01
CDX82264 Canola cytosol 31.59 31.01
CDY25374 Canola cytosol 31.4 30.83
CDX74120 Canola cytosol 31.59 30.45
CDY18835 Canola cytosol 31.21 30.09
CDY33444 Canola cytosol 31.59 30.02
CDY49990 Canola cytosol 31.59 29.86
CDY67306 Canola cytosol 18.5 29.29
CDX78670 Canola cytosol 28.97 28.97
CDX70671 Canola cytosol 28.97 28.97
CDY01062 Canola cytosol 27.29 28.97
CDY26490 Canola cytosol 28.97 28.92
CDY08491 Canola cytosol 27.1 28.77
CDY53919 Canola cytosol 27.48 28.77
CDX69477 Canola cytosol 28.79 28.73
CDX73850 Canola cytosol 27.48 28.66
CDY51544 Canola cytosol 28.22 28.22
CDY28697 Canola cytosol 28.22 28.22
CDY71043 Canola cytosol 15.14 25.71
CDY50320 Canola cytosol 11.96 24.24
CDX79329 Canola cytosol 11.78 23.86
CDX92056 Canola cytosol 23.93 23.36
CDX74202 Canola cytosol, plasma membrane 23.74 23.18
CDY21153 Canola cytosol 23.55 23.16
CDY29973 Canola cytosol 23.36 22.98
CDY50868 Canola cytosol 22.99 22.61
CDY42892 Canola cytosol 22.8 22.43
CDX88835 Canola mitochondrion 31.21 21.97
Protein Annotations
Gene3D:1.10.560.10MapMan:20.3.1.5Gene3D:3.30.260.10Gene3D:3.50.7.10GO:A0A078HH02UniProt:A0A078HH02
EnsemblPlants:CDY36138ProteinID:CDY36138ProteinID:CDY36138.1InterPro:Chap_CCT_epsiInterPro:Chaperone_TCP-1InterPro:Chaperonin_TCP-1_CS
InterPro:Cpn60/TCP-1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006457GO:GO:0008150
GO:GO:0009987GO:GO:0051082InterPro:GROEL-like_equatorial_sfEnsemblPlantsGene:GSBRNA2T00059983001InterPro:GroEL-like_apical_dom_sfInterPro:IPR027409
InterPro:IPR027410InterPro:IPR027413PFAM:PF00118PRINTS:PR00304ScanProsite:PS00750ScanProsite:PS00751
ScanProsite:PS00995PANTHER:PTHR11353PANTHER:PTHR11353:SF178SUPFAM:SSF48592SUPFAM:SSF52029SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sfTIGRFAMs:TIGR02343UniParc:UPI0004EEE2B7:::
Description
BnaA08g19100DBnaA08g19100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH02]
Coordinates
chrLK032367:+:349543..352875
Molecular Weight (calculated)
59417.0 Da
IEP (calculated)
5.332
GRAVY (calculated)
-0.199
Length
535 amino acids
Sequence
(BLAST)
001: MALAFDEFGR PFIILREQDQ KTRLRGIDAQ KANIAAGKAV ARILRSSLGP KGMDKMLQGP DGDVTISNDG ATILEQMDVD NQIAKLMVEL SRSQDYEIGD
101: GTTGVVVMAG ALLEQAERQL DRGIHPIRIA EGYEMASRVA VEHLERIAQK FEFDVNNYEP LVQTCMTTLS SKIVNRCKRS LAEIAVKAVL AVADLERRDV
201: NLDLIKVEGK VGGKLEDTEL IYGILVDKDM SHPQMPKHIE DAHIAILTCP FEPPKPKTKH KVDIDTVEKF ETLRKQEQQY FDEMVQKCKD VGATLVICQW
301: GFDDEANHLL MHRNLPAVRW VGGVELELIA IATGGRIVPR FQELTPEKLG KAGMVREKSF GTTKERMLYI EHCANSKAVT IFIRGGNKMM IEETKRSIHD
401: ALCVARNLIR NNSIVYGGGA AEITCSLAVD AAADKYPGVE QYAIRAFAEA LDSVPMALAE NSGLQPIETL SAVKSQQIKE NIPFYGIDCN DVGTNDMREQ
501: NVFETLIGKQ QQILLATQVV KMILKIDDVI SNSEY
Best Arabidopsis Sequence Match ( AT1G24510.1 )
(BLAST)
001: MALAFDEFGR PFIILREQDQ KTRLRGIDAQ KANIAAGKAV ARILRSSLGP KGMDKMLQGP DGDITITNDG ATILEQMDVD NQIAKLMVEL SRSQDYEIGD
101: GTTGVVVMAG ALLEQAERQL DRGIHPIRIA EGYEMASRVA VEHLERIAQK FEFDVNNYEP LVQTCMTTLS SKIVNRCKRS LAEIAVKAVL AVADLERRDV
201: NLDLIKVEGK VGGKLEDTEL IYGILIDKDM SHPQMPKQIE DAHIAILTCP FEPPKPKTKH KVDIDTVEKF ETLRKQEQQY FDEMVQKCKD VGATLVICQW
301: GFDDEANHLL MHRNLPAVRW VGGVELELIA IATGGRIVPR FQELTPEKLG KAGVVREKSF GTTKERMLYI EHCANSKAVT VFIRGGNKMM IEETKRSIHD
401: ALCVARNLIR NKSIVYGGGA AEIACSLAVD AAADKYPGVE QYAIRAFAEA LDSVPMALAE NSGLQPIETL SAVKSQQIKE NIPFYGIDCN DVGTNDMREQ
501: NVFETLIGKQ QQILLATQVV KMILKIDDVI SNSEY
Arabidopsis Description
CCT5T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:O04450]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.