Factsheet for HORVU7Hr1G088080.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G068820.1
HORVU5Hr1G085530.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G24510.1	HORVU4Hr1G068820.1	AT5G20890.1	21798944
AT1G24510.1	HORVU5Hr1G085530.1	AT5G20890.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G358400.1	Wheat	cytosol, unclear	99.07	99.63
TraesCS7B01G269300.2	Wheat	cytosol	99.07	99.63
TraesCS7D01G364400.2	Wheat	cytosol	98.7	99.25
PGSC0003DMT400073555	Potato	cytosol	44.98	92.72
Os06t0562600-01	Rice	cytosol, extracellular, plasma membrane	91.82	92.34
EER88530	Sorghum	cytosol	91.26	91.78
EER97880	Sorghum	cytosol	91.26	91.78
Solyc05g013990.2.1	Tomato	nucleus	90.33	90.84
GSMUA_Achr6P06770_001	Banana	cytosol	81.41	90.68
PGSC0003DMT400027968	Potato	cytosol	36.43	89.5
Zm00001d018694_P002	Maize	cytosol	91.08	89.42
Zm00001d007960_P001	Maize	cytosol	91.08	89.42
GSMUA_AchrUn_...	Banana	cytosol	88.29	88.78
KRH31372	Soybean	nucleus	88.1	88.6
KRG97508	Soybean	cytosol, nucleus	87.92	88.41
CDY36138	Canola	cytosol	86.99	87.48
CDY51593	Canola	cytosol	86.99	87.31
CDY54836	Canola	cytosol	86.8	87.29
CDY03881	Canola	cytosol	86.8	87.29
Bra032797.1-P	Field mustard	cytosol	86.8	87.29
Bra012506.1-P	Field mustard	cytosol	86.8	87.29
Bra010965.1-P	Field mustard	cytosol	86.62	87.1
CDX84951	Canola	cytosol	86.43	86.92
AT1G24510.1	Thale cress	cytosol	86.43	86.92
VIT_12s0028g00350.t01	Wine grape	cytosol	85.87	86.36
HORVU1Hr1G054530.14	Barley	cytosol	45.17	82.37
VIT_01s0137g00250.t01	Wine grape	cytosol	89.22	72.51
HORVU7Hr1G034140.1	Barley	plasma membrane	36.25	36.52
HORVU5Hr1G085530.1	Barley	mitochondrion	34.39	33.7
HORVU4Hr1G068820.1	Barley	cytosol	34.2	32.86
HORVU7Hr1G080310.1	Barley	cytosol	31.97	30.82
HORVU6Hr1G025270.1	Barley	cytosol	29.93	28.9
HORVU7Hr1G044070.2	Barley	cytosol	28.81	27.15
HORVU6Hr1G091690.4	Barley	cytosol, plastid	27.51	25.96
HORVU1Hr1G052730.26	Barley	cytosol	17.47	24.23
HORVU4Hr1G040660.1	Barley	cytosol	23.79	23.7

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.5	Gene3D:3.30.260.10	Gene3D:3.50.7.10	UniProt:A0A287X7T1	InterPro:Chap_CCT_epsi
InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
EnsemblPlantsGene:HORVU7Hr1G088080	EnsemblPlants:HORVU7Hr1G088080.1	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118
PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF178
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02343	UniParc:UPI000B483CA0
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:532183356..532189161

Molecular Weight (calculated)

59077.6 Da

IEP (calculated)

5.331

GRAVY (calculated)

-0.136

Length

538 amino acids

Sequence
(BLAST)

001: PAAMALAFDE YGRPFIILRE QEKKSRLQGL DAQKANIAAG KSVARILRTS LGPKGMDKML QSPDGDVTIT NDGATILELM DVDNQIAKLM VELSRSQDYD
101: IGDGTTGVVV MAGSLLEQAE KLLERGIHPI RIAEGYEMAS RIAVDHLESI STKYEFSATD IEPLVQTCMT TLSSKIVSRC KRALAEIAVK AVLAVADLER
201: KDVNLDLIKV EGKVGGKLED TELVQGIIVD KDMSHPQMPK RIEDAHIAIL TCPFEPPKPK TKHKVDIDTV EKFQTLRGQE QKYFDDMVQK CKDVGATLVI
301: CQWGFDDEAN HLLMQRELPA VRWVGGVELE LIAIATGGRI VPRFQELTTE KLGKAGLVRE KSFGTTKDRM LYIEKCANSK AVTIFIRGGN KMMIEETKRS
401: IHDALCVARN LIINNSIVYG GGSAEISCSI AVDAAADRHP GVEQYAIRAF ADALDAIPLA LAENSGLAPI DTLTVVKSQH VKENNSRCGI DCNDVGTNDM
501: KEQNVFETLI GKQQQILLAT QVVKMILKID DVITPSEY

Best Arabidopsis Sequence Match ( AT1G24510.1 )
(BLAST)

001: MALAFDEFGR PFIILREQDQ KTRLRGIDAQ KANIAAGKAV ARILRSSLGP KGMDKMLQGP DGDITITNDG ATILEQMDVD NQIAKLMVEL SRSQDYEIGD
101: GTTGVVVMAG ALLEQAERQL DRGIHPIRIA EGYEMASRVA VEHLERIAQK FEFDVNNYEP LVQTCMTTLS SKIVNRCKRS LAEIAVKAVL AVADLERRDV
201: NLDLIKVEGK VGGKLEDTEL IYGILIDKDM SHPQMPKQIE DAHIAILTCP FEPPKPKTKH KVDIDTVEKF ETLRKQEQQY FDEMVQKCKD VGATLVICQW
301: GFDDEANHLL MHRNLPAVRW VGGVELELIA IATGGRIVPR FQELTPEKLG KAGVVREKSF GTTKERMLYI EHCANSKAVT VFIRGGNKMM IEETKRSIHD
401: ALCVARNLIR NKSIVYGGGA AEIACSLAVD AAADKYPGVE QYAIRAFAEA LDSVPMALAE NSGLQPIETL SAVKSQQIKE NIPFYGIDCN DVGTNDMREQ
501: NVFETLIGKQ QQILLATQVV KMILKIDDVI SNSEY

Arabidopsis Description

CCT5T-complex protein 1 subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:O04450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.