Factsheet for HORVU7Hr1G044070.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G124100.1	Wheat	cytosol, golgi, unclear	88.44	92.66
TraesCS7A01G217200.1	Wheat	cytosol	87.74	91.93
TraesCS4A01G427500.1	Wheat	cytosol, unclear	87.22	91.38
TraesCS7A01G062100.1	Wheat	cytosol	87.22	91.38
TraesCS7D01G056800.1	Wheat	cytosol	87.22	91.38
HORVU1Hr1G052730.26	Barley	cytosol	62.0	91.24
TraesCS7D01G218500.2	Wheat	cytosol	88.09	88.09
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	83.36	87.34
Zm00001d052056_P005	Maize	plasma membrane	82.14	86.06
EES05938	Sorghum	cytosol	82.14	86.06
Zm00001d018349_P001	Maize	cytosol	81.79	85.69
VIT_15s0021g02230.t01	Wine grape	cytosol	78.63	82.23
KRH59103	Soybean	nucleus	78.11	81.83
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	78.11	81.83
GSMUA_Achr2P01100_001	Banana	cytosol, extracellular	39.05	81.39
AT3G20050.1	Thale cress	cytosol	77.41	81.1
CDY25374	Canola	cytosol	76.88	80.55
CDY42227	Canola	cytosol	76.71	80.37
CDY24564	Canola	cytosol	76.71	80.37
Solyc01g090750.2.1	Tomato	nucleus	76.53	80.18
PGSC0003DMT400066954	Potato	cytosol	76.36	80.0
CDY36063	Canola	cytosol	75.66	79.27
CDX82264	Canola	cytosol	75.66	79.27
Bra001773.1-P	Field mustard	cytosol	75.66	79.12
Bra035820.1-P	Field mustard	cytosol	76.88	78.96
CDY33444	Canola	cytosol	76.53	77.62
Bra038252.1-P	Field mustard	cytosol	76.71	57.56
HORVU5Hr1G085530.1	Barley	mitochondrion	31.87	33.15
HORVU6Hr1G025270.1	Barley	cytosol	31.87	32.67
HORVU4Hr1G068820.1	Barley	cytosol	31.87	32.5
HORVU7Hr1G088080.1	Barley	cytosol	27.15	28.81
HORVU7Hr1G034140.1	Barley	plasma membrane	26.8	28.65
HORVU1Hr1G054530.14	Barley	cytosol	14.01	27.12
HORVU7Hr1G080310.1	Barley	cytosol	26.27	26.88
HORVU4Hr1G040660.1	Barley	cytosol	23.82	25.19
HORVU6Hr1G091690.4	Barley	cytosol, plastid	23.64	23.68

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.1	Gene3D:3.30.260.10	Gene3D:3.50.7.10	UniProt:A0A287WAH4	InterPro:Chap_CCT_alpha
InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf
EnsemblPlantsGene:HORVU7Hr1G044070	EnsemblPlants:HORVU7Hr1G044070.2	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118
PRINTS:PR00304	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF177	SUPFAM:SSF48592
SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02340	UniParc:UPI000B471F85	SEG:seg

Description

No Description!

Coordinates

chrchr7H:-:135925759..135931661

Molecular Weight (calculated)

62746.9 Da

IEP (calculated)

8.582

GRAVY (calculated)

-0.268

Length

571 amino acids

Sequence
(BLAST)

001: HRNLAPHSLL SNSPVPLPLP HPRRRHGDHR PGPRHHGRAP VRPGRPHPER IGVPGGGQHR QVLARPRRAR QEMLVDDIGD VTITNDGATI LRMLEVEHPA
101: AKVLVELAEL QDREVGDGTT SVVIIAAELL KRANDLVRNK IHPTSIISGY RLAMREACKY VEEKLSVKVE KLGKDSLINC AKTSMSSKLI TTDDNFFANL
201: VVEAVQAVKT TNSKGEVKYP IKSINILKAH GKSAKESYLL NGYALNTGRA AQGMPTRVTP ARIACLDFNL QKTKMQMGVQ VLVSDPRELE KIRERESDIT
301: KERIEKVLKA GANVVFTTKG IDDMSLKYFV EAGAIAVRRV RKEDLRHVAK ATGATMVTTF ADMEGEETFD PSFLGHADEV VEERISDDEI ILVKGTKNTS
401: AVSIILRGAN DFMLDEIERS LHDALCIVKR TLESNTVVAG GGAVEAALSV YLENLATTLG SREQLAIAEF AESLLIIPKV LAVNAAKDAT ELVAKLRSYH
501: HKAQTNADKQ HLSSMGLDLT KGVIRNNLEH GVIEPAMSKV KIIQFATEAA ITIVRIDDMI KLDKEESGQE E

Best Arabidopsis Sequence Match ( AT3G20050.1 )
(BLAST)

001: MSISAQNPDI SGDRQSGQDV RTQNVMACQA VSNIVKTSLG PVGLDKMLVD DIGDVTITND GATILRMLEV EHPAAKVLVE LAELQDREVG DGTTSVVIVA
101: AELLKRANDL VRNKIHPTSI ISGYRLAMRE SCKYIEEKLV TKVEKLGKVP LINCAKTSMS SKLISGDSDF FANLVVEAVL SVKMTNQRGE IKYPIKGINI
201: LKAHGQSARD SYLLNGYALN TGRAAQGMPL RVSPAKIACL DFNLQKTKMQ LGVQVVVNDP RELEKIRQRE ADMTKERIEK LLKAGANVIL TTKGIDDMAL
301: KYFVEAGAIA VRRVRKEDMR HVAKATGATL VTTFADMEGE ETFDPAHLGS ADEVVEERIA DDDVILIKGT KTSSAVSLIL RGANDYMLDE MERALHDALC
401: IVKRTLESNT VVAGGGAVES ALSVYLEHLA TTLGSREQLA IAEFADALLI IPKVLAVNAA KDATELVAKL RAYHHTAQTK ADKKHYSSMG LDLVNGTIRN
501: NLEAGVIEPA MSKVKIIQFA TEAAITILRI DDMIKLVKDE SQGEE

Arabidopsis Description

CCT1T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P28769]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.