CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11302	Canola	cytosol	47.51	96.88
CDY43747	Canola	cytosol	47.51	96.88
KRH62761	Soybean	mitochondrion	37.16	71.32
KRH57568	Soybean	cytosol	27.97	66.36
KRH76087	Soybean	cytosol, endoplasmic reticulum	37.93	63.06
CDY67306	Canola	cytosol	69.35	53.55
CDY72126	Canola	cytosol	33.33	41.04
CDY72106	Canola	cytosol	32.95	40.57
CDY08491	Canola	cytosol	72.41	37.5
CDY01062	Canola	cytosol	72.03	37.3
CDX73850	Canola	cytosol	72.41	36.84
CDY53919	Canola	cytosol	72.03	36.79
CDY50320	Canola	cytosol	23.75	23.48
CDX79329	Canola	cytosol	22.99	22.73
CDX70950	Canola	cytosol	38.7	19.17
CDX92428	Canola	cytosol	38.31	18.98
CDY09085	Canola	cytosol	38.31	18.98
CDY16573	Canola	cytosol	38.31	18.98
CDY42227	Canola	cytosol	35.63	17.06
CDY25374	Canola	cytosol	35.63	17.06
CDY24564	Canola	cytosol	35.25	16.88
CDX82264	Canola	cytosol	34.87	16.7
CDY36063	Canola	cytosol	34.87	16.7
CDY33444	Canola	cytosol	35.63	16.52
CDY54836	Canola	cytosol	32.95	16.07
CDY36138	Canola	cytosol	32.57	15.89
CDX84951	Canola	cytosol	32.18	15.7
CDY03881	Canola	cytosol	31.8	15.51
CDY51593	Canola	cytosol	31.8	15.49
CDY18509	Canola	cytosol	31.03	15.25
CDY24438	Canola	cytosol, plastid	30.27	14.82
CDX92212	Canola	cytosol, plastid	30.27	14.82
CDX95541	Canola	cytosol, plastid	30.27	14.79
CDY18835	Canola	cytosol	29.89	14.05
CDX74120	Canola	cytosol	29.89	14.05
CDY49990	Canola	cytosol	29.89	13.78
CDX88835	Canola	mitochondrion	38.31	13.16
CDX74202	Canola	cytosol, plasma membrane	24.9	11.86
CDX92056	Canola	cytosol	24.52	11.68
CDY50868	Canola	cytosol	24.14	11.58
CDY29973	Canola	cytosol	24.14	11.58
CDY21153	Canola	cytosol	24.14	11.58
CDY51544	Canola	cytosol	23.37	11.4
CDY28697	Canola	cytosol	23.37	11.4
CDX78670	Canola	cytosol	23.37	11.4
CDX70671	Canola	cytosol	23.37	11.4
CDY42892	Canola	cytosol	23.75	11.4
CDY26490	Canola	cytosol	23.37	11.38
CDX69477	Canola	cytosol	23.37	11.38
CDY71043	Canola	cytosol	4.98	4.13

Protein Annotations

Gene3D:1.10.560.10	Gene3D:3.50.7.10	MapMan:35.1	GO:A0A078IFF7	UniProt:A0A078IFF7	EnsemblPlants:CDY47913
ProteinID:CDY47913	ProteinID:CDY47913.1	InterPro:Chap_CCT_eta	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	ncoils:Coil
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	EnsemblPlantsGene:GSBRNA2T00088431001
InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409	InterPro:IPR027410	InterPro:IPR027413	PFAM:PF00118	PRINTS:PR00304
ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF22	SUPFAM:SSF48592
SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	UniParc:UPI0004EEAC04	SEG:seg	:	:

Description

BnaAnng09450DBnaAnng09450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFF7]

Coordinates

chrLK032744:-:115756..117116

Molecular Weight (calculated)

28353.7 Da

IEP (calculated)

5.830

GRAVY (calculated)

0.072

Length

261 amino acids

Sequence
(BLAST)

001: MASMMQPQII LLKEGTDTSQ GKAQLLSNIN SVTAVGDVVR TTLGPRGMDK LIHDDKGSVT ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV
101: VLLAAEFLKE AKPFVEDGVH SQNLIRSYRT ASTLAIEKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDDVMATG NDDRLNLIGI
201: KKVKDFYLFK AFLIGFALEL IDGFAGFEQQ PKKFLNLNIL LLNIKLELKS EKENTEIRLA L

Best Arabidopsis Sequence Match ( AT3G11830.1 )
(BLAST)

001: MASMMQPQII LLKEGTDTSQ GKAQLVSNIN ACTAVGDVVR TTLGPRGMDK LIHDDKGSVT ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV
101: VLLAAEFLKE AKPFIEDGVH AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDAVMAIG NDDRLNLIGI
201: KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301: LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR
401: RAVKNSTVVP GGGAIDMEIS KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS YGVDINTGGI ADSFANFVWE
501: PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG AMGRGRGGGR GRGMRRR

Arabidopsis Description

CCT7T-complex protein 1 subunit eta [Source:UniProtKB/Swiss-Prot;Acc:Q9SF16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.