CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76087	Soybean	cytosol, endoplasmic reticulum	92.65	80.25
KRH57568	Soybean	cytosol	52.21	64.55
CDY43747	Canola	cytosol	52.94	56.25
CDY11302	Canola	cytosol	52.94	56.25
KRH33254	Soybean	cytosol	22.06	37.97
CDY47913	Canola	cytosol	71.32	37.16
KRH14704	Soybean	cytosol, endoplasmic reticulum, nucleus	79.41	19.29
KRH73433	Soybean	endoplasmic reticulum, nucleus	77.21	18.75
KRH59103	Soybean	nucleus	41.91	10.46
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	41.91	10.46
KRH25193	Soybean	nucleus	38.24	9.87
KRH30467	Soybean	nucleus	38.24	9.87
KRH41771	Soybean	endoplasmic reticulum, nucleus	34.56	8.82
KRH31372	Soybean	nucleus	34.56	8.79
KRG97508	Soybean	cytosol, nucleus	34.56	8.79
KRH60476	Soybean	endoplasmic reticulum	33.82	8.63
KRH49364	Soybean	endoplasmic reticulum, nucleus	32.35	8.61
KRH38791	Soybean	cytosol	34.56	8.48
KRH09301	Soybean	cytosol, endoplasmic reticulum, nucleus	34.56	8.48
KRG92501	Soybean	cytosol	33.09	8.08
KRH08492	Soybean	cytosol, endoplasmic reticulum, nucleus	27.94	6.97
KRH70153	Soybean	nucleus	27.21	6.79
KRH46911	Soybean	endoplasmic reticulum	25.0	6.36
KRH01781	Soybean	nucleus	25.0	6.36
KRH62778	Soybean	cytosol, endoplasmic reticulum	1.47	0.57

Protein Annotations

Gene3D:1.10.560.10	MapMan:35.1	UniProt:A0A0R0KCV3	EMBL:ACUP02002356	InterPro:Chap_CCT_eta	InterPro:Chaperone_TCP-1
InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	EnsemblPlantsGene:GLYMA_04G129800	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005832	GO:GO:0006457	GO:GO:0006458	GO:GO:0008150	GO:GO:0009987
GO:GO:0044183	GO:GO:0051082	GO:GO:0061077	InterPro:GROEL-like_equatorial_sf	InterPro:IPR027413	EnsemblPlants:KRH62761
ProteinID:KRH62761	ProteinID:KRH62761.1	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00995	PANTHER:PTHR11353
PANTHER:PTHR11353:SF22	SUPFAM:SSF48592	SignalP:SignalP-noTM	UniParc:UPI0006EDC2D6	:	:

Description

hypothetical protein

Coordinates

chr4:-:18133575..18134193

Molecular Weight (calculated)

14975.3 Da

IEP (calculated)

7.578

GRAVY (calculated)

0.127

Length

136 amino acids

Sequence
(BLAST)

001: MKYRSKLNPS CLSLFLLHLQ PWQGKPQLVS NINACTAVAN VVRTTLDPRG MDKLIHDDKG AVTISNDGAT IMKLLDIVHL ATKILADIAK SQDSEVGDGT
101: TTVVLLAAEF LREAKPFIED GVHSQNFIKL IFYIIN

Best Arabidopsis Sequence Match ( AT3G11830.1 )
(BLAST)

001: MASMMQPQII LLKEGTDTSQ GKAQLVSNIN ACTAVGDVVR TTLGPRGMDK LIHDDKGSVT ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV
101: VLLAAEFLKE AKPFIEDGVH AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDAVMAIG NDDRLNLIGI
201: KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301: LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR
401: RAVKNSTVVP GGGAIDMEIS KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS YGVDINTGGI ADSFANFVWE
501: PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG AMGRGRGGGR GRGMRRR

Arabidopsis Description

CCT7T-complex protein 1 subunit eta [Source:UniProtKB/Swiss-Prot;Acc:Q9SF16]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.