CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57568	Soybean	cytosol	32.91	23.64
KRH62761	Soybean	mitochondrion	37.97	22.06
KRH76087	Soybean	cytosol, endoplasmic reticulum	41.77	21.02
KRG92501	Soybean	cytosol	86.08	12.21
KRH09301	Soybean	cytosol, endoplasmic reticulum, nucleus	81.01	11.55
KRH38791	Soybean	cytosol	81.01	11.55
KRG97508	Soybean	cytosol, nucleus	46.84	6.92
KRH31372	Soybean	nucleus	46.84	6.92
KRH42973	Soybean	cytosol, endoplasmic reticulum, nucleus	46.84	6.79
KRH59103	Soybean	nucleus	46.84	6.79
KRH49364	Soybean	endoplasmic reticulum, nucleus	41.77	6.46
KRH30467	Soybean	nucleus	43.04	6.45
KRH25193	Soybean	nucleus	43.04	6.45
KRH14704	Soybean	cytosol, endoplasmic reticulum, nucleus	44.3	6.25
KRH73433	Soybean	endoplasmic reticulum, nucleus	44.3	6.25
KRH41771	Soybean	endoplasmic reticulum, nucleus	40.51	6.0
KRH60476	Soybean	endoplasmic reticulum	40.51	6.0
KRH46911	Soybean	endoplasmic reticulum	35.44	5.23
KRH01781	Soybean	nucleus	35.44	5.23
KRH08492	Soybean	cytosol, endoplasmic reticulum, nucleus	35.44	5.14
KRH70153	Soybean	nucleus	35.44	5.14
KRH62778	Soybean	cytosol, endoplasmic reticulum	1.27	0.28

Protein Annotations

Gene3D:1.10.560.10	MapMan:35.1	EMBL:ACUP02006430	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1
EnsemblPlantsGene:GLYMA_10G109800	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005832
GO:GO:0006457	GO:GO:0006458	GO:GO:0008150	GO:GO:0009987	GO:GO:0044183	GO:GO:0051082
GO:GO:0061077	InterPro:GROEL-like_equatorial_sf	InterPro:IPR027413	UniProt:K7LIF9	EnsemblPlants:KRH33254	ProteinID:KRH33254
ProteinID:KRH33254.1	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995
PANTHER:PTHR11353	PANTHER:PTHR11353:SF24	SUPFAM:SSF48592	UniParc:UPI000295B890	:	:

Description

hypothetical protein

Coordinates

chr10:+:25535517..25536216

Molecular Weight (calculated)

8532.4 Da

IEP (calculated)

4.298

GRAVY (calculated)

0.158

Length

79 amino acids

Sequence
(BLAST)

1: MIDVYQAVAD IIRTTLGPRS KLKMLLDASG GIVVTNDGNA ILREIDLAHP DAKSMVELSR TQDEEVGDGT TSIIILSMF

Best Arabidopsis Sequence Match ( AT5G26360.1 )
(BLAST)

001: MHAPVLVLSD SLKRESGSKV HHGNIQASKA VADIIRTTLG PRSMLKMLLD AGGGIVVTND GNAILRELDV AHPAAKSMIE LSRTQDEEVG DGTTSVIVLA
101: GEMLHVAEAF LEKNYHPTVI CRAYIKALED SIAVLDKIAM SIDINDRSQV LGLVKSCIGT KFTSQFGDLI ADLAIDATTT VGVDLGQGLR EVDIKKYIKV
201: EKVPGGQFED SEVLKGVMFN KDVVAPGKMK RKIVNPRIIL LDCPLEYKKG ENQTNAELVR EEDWEVLLKL EEEYIENICV QILKFKPDLV ITEKGLSDLA
301: CHYFSKAGVS AIRRLRKTDN NRIAKACGAV IVNRPDELQE SDIGTGAGLF EVKKIGDDFF SFIVDCKEPK ACTVLLRGPS KDFINEVERN LQDAMSVARN
401: IIKNPKLVPG GGATELTVSA TLKQKSATIE GIEKWPYEAA AIAFEAIPRT LAQNCGVNVI RTMTALQGKH ANGENAWTGI DGNTGAIADM KESKIWDSYN
501: VKAQTFKTAI EAACMLLRID DIVSGIKKKQ APGSGPSKPT IETEGDADNE QILPD

Arabidopsis Description

CCT3T-complex protein 1 subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A178UHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.