Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43747 | Canola | cytosol | 100.0 | 100.0 |
| KRH62761 | Soybean | mitochondrion | 56.25 | 52.94 |
| CDY47913 | Canola | cytosol | 96.88 | 47.51 |
| KRH76087 | Soybean | cytosol, endoplasmic reticulum | 57.03 | 46.5 |
| KRH57568 | Soybean | cytosol | 36.72 | 42.73 |
| CDY67306 | Canola | cytosol | 93.75 | 35.5 |
| CDY72126 | Canola | cytosol | 45.31 | 27.36 |
| CDY72106 | Canola | cytosol | 45.31 | 27.36 |
| CDY08491 | Canola | cytosol | 96.88 | 24.6 |
| CDY01062 | Canola | cytosol | 96.09 | 24.4 |
| CDY53919 | Canola | cytosol | 96.88 | 24.27 |
| CDX73850 | Canola | cytosol | 96.09 | 23.98 |
| CDY50320 | Canola | cytosol | 28.91 | 14.02 |
| CDX79329 | Canola | cytosol | 28.12 | 13.64 |
| CDX92428 | Canola | cytosol | 45.31 | 11.01 |
| CDX70950 | Canola | cytosol | 45.31 | 11.01 |
| CDY09085 | Canola | cytosol | 45.31 | 11.01 |
| CDY16573 | Canola | cytosol | 45.31 | 11.01 |
| CDY25374 | Canola | cytosol | 44.53 | 10.46 |
| CDY42227 | Canola | cytosol | 44.53 | 10.46 |
| CDY24564 | Canola | cytosol | 44.53 | 10.46 |
| CDX82264 | Canola | cytosol | 43.75 | 10.28 |
| CDY36063 | Canola | cytosol | 43.75 | 10.28 |
| CDY33444 | Canola | cytosol | 44.53 | 10.12 |
| CDY18509 | Canola | cytosol | 37.5 | 9.04 |
| CDY54836 | Canola | cytosol | 37.5 | 8.97 |
| CDX92212 | Canola | cytosol, plastid | 36.72 | 8.82 |
| CDY24438 | Canola | cytosol, plastid | 36.72 | 8.82 |
| CDX95541 | Canola | cytosol, plastid | 36.72 | 8.8 |
| CDY36138 | Canola | cytosol | 36.72 | 8.79 |
| CDX84951 | Canola | cytosol | 35.16 | 8.41 |
| CDY03881 | Canola | cytosol | 35.16 | 8.41 |
| CDY51593 | Canola | cytosol | 35.16 | 8.4 |
| CDX88835 | Canola | mitochondrion | 45.31 | 7.63 |
| CDY18835 | Canola | cytosol | 32.81 | 7.57 |
| CDX74120 | Canola | cytosol | 32.03 | 7.39 |
| CDX74202 | Canola | cytosol, plasma membrane | 31.25 | 7.3 |
| CDY49990 | Canola | cytosol | 32.03 | 7.24 |
| CDY21153 | Canola | cytosol | 30.47 | 7.17 |
| CDY50868 | Canola | cytosol | 30.47 | 7.17 |
| CDY42892 | Canola | cytosol | 30.47 | 7.17 |
| CDY29973 | Canola | cytosol | 30.47 | 7.17 |
| CDX92056 | Canola | cytosol | 30.47 | 7.12 |
| CDY51544 | Canola | cytosol | 26.56 | 6.36 |
| CDY28697 | Canola | cytosol | 26.56 | 6.36 |
| CDX78670 | Canola | cytosol | 26.56 | 6.36 |
| CDX70671 | Canola | cytosol | 26.56 | 6.36 |
| CDY26490 | Canola | cytosol | 26.56 | 6.34 |
| CDX69477 | Canola | cytosol | 26.56 | 6.34 |
| CDY71043 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:35.1 | GO:A0A078I0X8 | UniProt:A0A078I0X8 | EnsemblPlants:CDY11302 | ProteinID:CDY11302 |
| ProteinID:CDY11302.1 | ProteinID:CDY43747.1 | InterPro:Chap_CCT_eta | InterPro:Chaperone_TCP-1 | InterPro:Chaperonin_TCP-1_CS | InterPro:Cpn60/TCP-1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006457 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:GROEL-like_equatorial_sf | EnsemblPlantsGene:GSBRNA2T00049339001 | InterPro:IPR027413 |
| PFAM:PF00118 | PRINTS:PR00304 | ScanProsite:PS00751 | ScanProsite:PS00995 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF22 |
| SUPFAM:SSF48592 | UniParc:UPI0004EDD805 | : | : | : | : |
Description
BnaA03g01380DBnaA03g01380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0X8]
Coordinates
chrLK032010:+:636513..637683
Molecular Weight (calculated)
13675.6 Da
IEP (calculated)
6.262
GRAVY (calculated)
0.008
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKLIHDDKG SVIISNDGAT IMKLLDIVHP TAKILVDIAK SQDSEVGDGT TTVVLLAAEF LKEAKPFVED GVHSQNLIRS YRTASTLAIE KVKELAVSIE
101: GKSVEEKKGL LAKCAATTLS SKLIGGRE
101: GKSVEEKKGL LAKCAATTLS SKLIGGRE
001: MASMMQPQII LLKEGTDTSQ GKAQLVSNIN ACTAVGDVVR TTLGPRGMDK LIHDDKGSVT ISNDGATIMK LLDIVHPAAK ILVDIAKSQD SEVGDGTTTV
101: VLLAAEFLKE AKPFIEDGVH AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDAVMAIG NDDRLNLIGI
201: KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301: LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR
401: RAVKNSTVVP GGGAIDMEIS KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS YGVDINTGGI ADSFANFVWE
501: PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG AMGRGRGGGR GRGMRRR
101: VLLAAEFLKE AKPFIEDGVH AQNLIRSYRT ASTLAIAKVK ELAVSIEGKS VEEKKGLLAK CAATTLSSKL IGGEKEFFAT MVVDAVMAIG NDDRLNLIGI
201: KKVPGGNMRD SFLVDGVAFK KTFSYAGFEQ QPKKFLNPKI LLLNIELELK SEKENAEIRL SDPSQYQSIV DAEWNIIYDK LDKCVESGAK VVLSRLAIGD
301: LATQYFADRD IFCAGRVAEE DLNRVAAAAG GTVQTSVNNI IDEVLGTCEI FEEKQVGGER FNIFSGCPSG RTATIVLRGG ADQFIEEAER SLHDAIMIVR
401: RAVKNSTVVP GGGAIDMEIS KYLRQHSRTI AGKSQLFINS YAKALEVIPR QLCDNAGFDA TDVLNKLRQK HAMQSGEGAS YGVDINTGGI ADSFANFVWE
501: PAVVKINAIN AATEAACLIL SVDETVKNPK SESAQGDAAG AMGRGRGGGR GRGMRRR
Arabidopsis Description
CCT7T-complex protein 1 subunit eta [Source:UniProtKB/Swiss-Prot;Acc:Q9SF16]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.