Factsheet for Bra040591.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51544	Canola	cytosol	99.81	99.81
CDY28697	Canola	cytosol	99.81	99.81
AT3G02530.1	Thale cress	cytosol	97.94	97.94
Bra008652.1-P	Field mustard	cytosol	97.2	97.01
Bra006338.1-P	Field mustard	cytosol	81.12	95.59
VIT_14s0006g03200.t01	Wine grape	cytosol	91.4	91.4
GSMUA_Achr1P14710_001	Banana	cytosol	91.22	91.22
PGSC0003DMT400062134	Potato	cytosol	90.84	90.84
Solyc02g085790.2.1	Tomato	extracellular	90.84	90.84
Solyc02g063090.2.1	Tomato	nucleus, unclear	90.65	90.65
GSMUA_Achr4P16540_001	Banana	cytosol	90.47	90.47
KRH46911	Soybean	endoplasmic reticulum	90.28	90.28
KRH01781	Soybean	nucleus	90.28	90.28
PGSC0003DMT400033011	Potato	cytosol	90.09	90.09
Os05t0147400-01	Rice	cytosol, plasma membrane, plastid	88.6	88.6
EER97762	Sorghum	cytosol	87.85	87.85
Zm00001d007192_P001	Maize	cytosol	88.22	87.57
TraesCS6D01G383500.1	Wheat	unclear	85.61	85.61
TraesCS6A01G399300.1	Wheat	golgi	85.61	85.61
HORVU6Hr1G091690.4	Barley	cytosol, plastid	85.23	80.0
Bra032797.1-P	Field mustard	cytosol	28.6	28.6
Bra012506.1-P	Field mustard	cytosol	28.6	28.6
Bra010965.1-P	Field mustard	cytosol	28.41	28.41
Bra020134.1-P	Field mustard	cytosol	25.79	27.22
Bra002337.1-P	Field mustard	cytosol	26.73	27.13
Bra001773.1-P	Field mustard	cytosol	26.92	26.37
Bra035820.1-P	Field mustard	cytosol	26.73	25.72
Bra021300.1-P	Field mustard	cytosol	25.05	25.24
Bra022292.1-P	Field mustard	cytosol, plastid	24.86	24.95
Bra001423.1-P	Field mustard	cytosol	25.23	24.11
Bra034807.1-P	Field mustard	cytosol	23.74	23.92
Bra040242.1-P	Field mustard	cytosol	24.67	23.78
Bra038682.1-P	Field mustard	cytosol	24.67	23.78
Bra001174.1-P	Field mustard	cytosol	24.3	23.42
Bra001094.1-P	Field mustard	cytosol	23.55	22.99
Bra036422.1-P	Field mustard	cytosol	23.36	22.98
Bra031959.1-P	Field mustard	cytosol	22.99	22.61
Bra035423.1-P	Field mustard	cytosol	8.41	20.09
Bra006584.1-P	Field mustard	cytosol	26.36	18.85
Bra038252.1-P	Field mustard	cytosol	26.73	18.79

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.6	Gene3D:3.50.7.10	EnsemblPlantsGene:Bra040591	EnsemblPlants:Bra040591.1	EnsemblPlants:Bra040591.1-P
InterPro:Chap_CCT_zeta	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0010043
GO:GO:0016020	GO:GO:0046686	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	UniProt:M4FHL3	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750
ScanProsite:PS00751	PANTHER:PTHR11353	PANTHER:PTHR11353:SF21	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02347	UniParc:UPI0002547576	:	:	:

Description

AT3G02530 (E=3e-302) | chaperonin, putative

Coordinates

chrA05:-:23588744..23591975

Molecular Weight (calculated)

58899.5 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.162

Length

535 amino acids

Sequence
(BLAST)

001: MSVRVLNPNA EVLNKTAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPEEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVKKIIEL KNKVCAGNDN SFVIINQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDSLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLMNEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNVV GVSLVDGEPI DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT

Best Arabidopsis Sequence Match ( AT3G02530.1 )
(BLAST)

001: MSVRVLNPNA EVLNKSAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPQEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVQKIIEL KNKVCAGNDN SFVILNQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDCLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLINEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNIV GLDLQDGEPV DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT

Arabidopsis Description

CCT6AT-complex protein 1 subunit zeta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.