Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040591.1-P | Field mustard | cytosol | 97.94 | 97.94 |
| CDY28697 | Canola | cytosol | 97.94 | 97.94 |
| CDY51544 | Canola | cytosol | 97.94 | 97.94 |
| AT5G16070.1 | Thale cress | cytosol | 96.26 | 96.26 |
| PGSC0003DMT400062134 | Potato | cytosol | 91.59 | 91.59 |
| Solyc02g085790.2.1 | Tomato | extracellular | 91.4 | 91.4 |
| Solyc02g063090.2.1 | Tomato | nucleus, unclear | 91.4 | 91.4 |
| GSMUA_Achr1P14710_001 | Banana | cytosol | 91.4 | 91.4 |
| VIT_14s0006g03200.t01 | Wine grape | cytosol | 91.03 | 91.03 |
| PGSC0003DMT400033011 | Potato | cytosol | 90.65 | 90.65 |
| GSMUA_Achr4P16540_001 | Banana | cytosol | 90.65 | 90.65 |
| KRH46911 | Soybean | endoplasmic reticulum | 90.28 | 90.28 |
| KRH01781 | Soybean | nucleus | 89.91 | 89.91 |
| Os05t0147400-01 | Rice | cytosol, plasma membrane, plastid | 88.6 | 88.6 |
| EER97762 | Sorghum | cytosol | 87.85 | 87.85 |
| Zm00001d007192_P001 | Maize | cytosol | 88.22 | 87.57 |
| TraesCS6A01G399300.1 | Wheat | golgi | 86.36 | 86.36 |
| TraesCS6D01G383500.1 | Wheat | unclear | 86.36 | 86.36 |
| HORVU6Hr1G091690.4 | Barley | cytosol, plastid | 85.98 | 80.7 |
| AT1G24510.1 | Thale cress | cytosol | 28.79 | 28.79 |
| AT5G20890.1 | Thale cress | cytosol | 27.1 | 27.51 |
| AT3G20050.1 | Thale cress | cytosol | 27.1 | 26.61 |
| AT3G18190.1 | Thale cress | cytosol, plastid | 25.05 | 25.0 |
| AT3G11830.1 | Thale cress | cytosol | 25.05 | 24.06 |
| AT5G26360.1 | Thale cress | cytosol | 24.11 | 23.24 |
| AT3G03960.1 | Thale cress | cytosol | 22.99 | 22.4 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:20.3.1.6 | Gene3D:3.50.7.10 | EntrezGene:821160 | ProteinID:AAF32460.1 | ProteinID:AEE73823.1 |
| EMBL:AF387003 | ArrayExpress:AT3G02530 | EnsemblPlantsGene:AT3G02530 | RefSeq:AT3G02530 | TAIR:AT3G02530 | RefSeq:AT3G02530-TAIR-G |
| EnsemblPlants:AT3G02530.1 | TAIR:AT3G02530.1 | EMBL:AY062729 | EMBL:AY084739 | EMBL:AY114652 | Unigene:At.20380 |
| EMBL:BT001156 | InterPro:Chap_CCT_zeta | InterPro:Chaperone_TCP-1 | InterPro:Chaperonin_TCP-1_CS | InterPro:Cpn60/TCP-1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005832 | GO:GO:0006457 | GO:GO:0006458 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010043 | GO:GO:0016020 | GO:GO:0044183 | GO:GO:0046686 |
| GO:GO:0051082 | GO:GO:0061077 | InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 | InterPro:IPR027410 |
| InterPro:IPR027413 | RefSeq:NP_186902.1 | PFAM:PF00118 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00304 |
| ScanProsite:PS00750 | ScanProsite:PS00751 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF21 | UniProt:Q9M888 | SUPFAM:SSF48592 |
| SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02347 | UniParc:UPI00000AC5A6 | : |
Description
CCT6AT-complex protein 1 subunit zeta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M888]
Coordinates
chr3:-:528526..532612
Molecular Weight (calculated)
58953.5 Da
IEP (calculated)
6.120
GRAVY (calculated)
-0.172
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRVLNPNA EVLNKSAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPQEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVQKIIEL KNKVCAGNDN SFVILNQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDCLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLINEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNIV GLDLQDGEPV DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDTFKTPV VMGDEPDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPQEPID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVQKIIEL KNKVCAGNDN SFVILNQKGI
301: DPPSLDLLAR EGIIALRRAK RRNMERLVLA CGGEAVNSVD DLTPDCLGWA GLVYEHVLGE EKYTFVEQVK NPHSCTILIK GPNDHTIAQI KDAVRDGLRS
401: VKNTLEDECV VLGAGAFEVA ARQHLINEVK KTVQGRAQLG VEAFANALLV VPKTLAENAG LDTQDVIISL TSEHDKGNIV GLDLQDGEPV DPQLAGIFDN
501: YSVKRQLINS GPVIASQLLL VDEVIRAGRN MRKPT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.