Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021300.1-P | Field mustard | cytosol | 94.59 | 95.48 |
| CDY18509 | Canola | cytosol | 94.4 | 95.29 |
| CDY24438 | Canola | cytosol, plastid | 94.59 | 95.12 |
| CDX92212 | Canola | cytosol, plastid | 94.4 | 94.93 |
| CDX95541 | Canola | cytosol, plastid | 94.22 | 94.57 |
| Bra022292.1-P | Field mustard | cytosol, plastid | 93.66 | 94.18 |
| VIT_17s0000g03040.t01 | Wine grape | cytosol, plastid | 89.74 | 90.24 |
| PGSC0003DMT400014441 | Potato | plastid | 89.55 | 89.05 |
| KRH60476 | Soybean | endoplasmic reticulum | 88.43 | 88.93 |
| KRH41771 | Soybean | endoplasmic reticulum, nucleus | 88.43 | 88.93 |
| Solyc03g118910.1.1 | Tomato | plastid | 89.37 | 88.87 |
| KRH49364 | Soybean | endoplasmic reticulum, nucleus | 82.09 | 86.11 |
| GSMUA_Achr3P20910_001 | Banana | cytosol | 55.22 | 85.55 |
| Os02t0332200-01 | Rice | plasma membrane | 78.54 | 78.84 |
| TraesCS7A01G426400.1 | Wheat | unclear | 78.54 | 78.84 |
| TraesCS7D01G164400.1 | Wheat | cytosol | 78.54 | 78.84 |
| EER95631 | Sorghum | cytosol | 78.54 | 78.69 |
| HORVU7Hr1G034140.1 | Barley | plasma membrane | 78.36 | 78.65 |
| TraesCS7B01G068100.1 | Wheat | golgi, unclear | 78.17 | 78.46 |
| Zm00001d027371_P001 | Maize | plasma membrane | 77.99 | 78.13 |
| Zm00001d051742_P001 | Maize | plastid | 77.61 | 77.76 |
| GSMUA_Achr6P09540_001 | Banana | cytosol | 52.05 | 76.02 |
| TraesCS6B01G391500.1 | Wheat | mitochondrion | 72.39 | 74.33 |
| Os10t0514600-01 | Rice | plasma membrane | 75.0 | 74.31 |
| AT1G24510.1 | Thale cress | cytosol | 35.45 | 35.51 |
| AT5G20890.1 | Thale cress | cytosol | 33.4 | 33.97 |
| AT3G20050.1 | Thale cress | cytosol | 34.33 | 33.76 |
| AT3G11830.1 | Thale cress | cytosol | 32.84 | 31.6 |
| AT5G26360.1 | Thale cress | cytosol | 29.48 | 28.47 |
| AT5G16070.1 | Thale cress | cytosol | 25.0 | 25.05 |
| AT3G02530.1 | Thale cress | cytosol | 25.0 | 25.05 |
| AT3G03960.1 | Thale cress | cytosol | 25.56 | 24.95 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:20.3.1.4 | Gene3D:3.50.7.10 | EntrezGene:821346 | UniProt:A0A178V732 | ProteinID:AEE76061.1 |
| ArrayExpress:AT3G18190 | EnsemblPlantsGene:AT3G18190 | RefSeq:AT3G18190 | TAIR:AT3G18190 | RefSeq:AT3G18190-TAIR-G | EnsemblPlants:AT3G18190.1 |
| TAIR:AT3G18190.1 | EMBL:AY088570 | EMBL:AY099877 | Unigene:At.20883 | ProteinID:BAB02032.1 | EMBL:BT003418 |
| InterPro:Chap_CCT_delta | InterPro:Chaperone_TCP-1 | InterPro:Chaperonin_TCP-1_CS | InterPro:Cpn60/TCP-1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005832 | GO:GO:0006457 | GO:GO:0006458 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0044183 | GO:GO:0046686 | GO:GO:0051082 | GO:GO:0061077 | InterPro:GROEL-like_equatorial_sf |
| InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 | InterPro:IPR027410 | InterPro:IPR027413 | RefSeq:NP_188447.1 | ProteinID:OAP01696.1 |
| PFAM:PF00118 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00304 |
| ScanProsite:PS00750 | ScanProsite:PS00995 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF26 | UniProt:Q9LV21 | SUPFAM:SSF48592 |
| SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02342 | UniParc:UPI000000C008 | : |
Description
CCT4T-complex protein 1 subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9LV21]
Coordinates
chr3:+:6232108..6234183
Molecular Weight (calculated)
57778.7 Da
IEP (calculated)
7.775
GRAVY (calculated)
0.085
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVAAPMAS KPRGSKAESF VDNKRREDIR FANINSARAV SDAVRTSLGP KGMDKMISTA NGEVIITNDG ATILNKMEVL QPAAKMLVEL SKSQDSAAGD
101: GTTTVVVIAG ALLKECQSLL TNGIHPTVIS DSLHKACGKA IDILTAMAVP VELTDRDSLV KSASTSLNSK VVSQYSTLLA PLAVDAVLSV IDPEKPEIVD
201: LRDIKIVKKL GGTVDDTHTV KGLVFDKKVS RAAGGPTRVE NAKIAVIQFQ ISPPKTDIEQ SIVVSDYTQM DRILKEERNY ILGMIKKIKA TGCNVLLIQK
301: SILRDAVTDL SLHYLAKAKI MVIKDVERDE IEFVTKTLNC LPIANIEHFR AEKLGHADLV EEASLGDGKI LKITGIKDMG RTTSVLVRGS NQLVLDEAER
401: SLHDALCVVR CLVSKRFLIA GGGAPEIELS RQLGAWAKVL HGMEGYCVKS FAEALEVIPY TLAENAGLNP IAIVTELRNK HAQGEINAGI NVRKGQITNI
501: LEENVVQPLL VSTSAITLAT ECVRMILKID DIVTVR
101: GTTTVVVIAG ALLKECQSLL TNGIHPTVIS DSLHKACGKA IDILTAMAVP VELTDRDSLV KSASTSLNSK VVSQYSTLLA PLAVDAVLSV IDPEKPEIVD
201: LRDIKIVKKL GGTVDDTHTV KGLVFDKKVS RAAGGPTRVE NAKIAVIQFQ ISPPKTDIEQ SIVVSDYTQM DRILKEERNY ILGMIKKIKA TGCNVLLIQK
301: SILRDAVTDL SLHYLAKAKI MVIKDVERDE IEFVTKTLNC LPIANIEHFR AEKLGHADLV EEASLGDGKI LKITGIKDMG RTTSVLVRGS NQLVLDEAER
401: SLHDALCVVR CLVSKRFLIA GGGAPEIELS RQLGAWAKVL HGMEGYCVKS FAEALEVIPY TLAENAGLNP IAIVTELRNK HAQGEINAGI NVRKGQITNI
501: LEENVVQPLL VSTSAITLAT ECVRMILKID DIVTVR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.