Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26490 | Canola | cytosol | 97.76 | 97.57 |
| CDX69477 | Canola | cytosol | 97.76 | 97.57 |
| Bra008652.1-P | Field mustard | cytosol | 97.76 | 97.57 |
| CDX78670 | Canola | cytosol | 97.2 | 97.2 |
| CDX70671 | Canola | cytosol | 97.2 | 97.2 |
| AT3G02530.1 | Thale cress | cytosol | 96.26 | 96.26 |
| Bra006338.1-P | Field mustard | cytosol | 81.12 | 95.59 |
| Solyc02g085790.2.1 | Tomato | extracellular | 91.22 | 91.22 |
| PGSC0003DMT400062134 | Potato | cytosol | 91.03 | 91.03 |
| VIT_14s0006g03200.t01 | Wine grape | cytosol | 91.03 | 91.03 |
| Solyc02g063090.2.1 | Tomato | nucleus, unclear | 90.84 | 90.84 |
| GSMUA_Achr1P14710_001 | Banana | cytosol | 90.65 | 90.65 |
| PGSC0003DMT400033011 | Potato | cytosol | 90.47 | 90.47 |
| GSMUA_Achr4P16540_001 | Banana | cytosol | 89.91 | 89.91 |
| KRH46911 | Soybean | endoplasmic reticulum | 89.72 | 89.72 |
| KRH01781 | Soybean | nucleus | 89.72 | 89.72 |
| Os05t0147400-01 | Rice | cytosol, plasma membrane, plastid | 88.41 | 88.41 |
| EER97762 | Sorghum | cytosol | 87.48 | 87.48 |
| Zm00001d007192_P001 | Maize | cytosol | 87.66 | 87.01 |
| TraesCS6A01G399300.1 | Wheat | golgi | 84.67 | 84.67 |
| TraesCS6D01G383500.1 | Wheat | unclear | 84.67 | 84.67 |
| HORVU6Hr1G091690.4 | Barley | cytosol, plastid | 84.67 | 79.47 |
| AT1G24510.1 | Thale cress | cytosol | 28.79 | 28.79 |
| AT5G20890.1 | Thale cress | cytosol | 26.73 | 27.13 |
| AT3G20050.1 | Thale cress | cytosol | 25.79 | 25.32 |
| AT3G18190.1 | Thale cress | cytosol, plastid | 25.05 | 25.0 |
| AT3G11830.1 | Thale cress | cytosol | 24.86 | 23.88 |
| AT5G26360.1 | Thale cress | cytosol | 24.3 | 23.42 |
| AT3G03960.1 | Thale cress | cytosol | 22.62 | 22.04 |
Protein Annotations
| Gene3D:1.10.560.10 | MapMan:20.3.1.6 | Gene3D:3.50.7.10 | EntrezGene:831464 | UniProt:A0A178UF36 | ProteinID:AED92243.1 |
| ArrayExpress:AT5G16070 | EnsemblPlantsGene:AT5G16070 | RefSeq:AT5G16070 | TAIR:AT5G16070 | RefSeq:AT5G16070-TAIR-G | EnsemblPlants:AT5G16070.1 |
| TAIR:AT5G16070.1 | EMBL:AY128362 | Unigene:At.27593 | EMBL:BT008893 | ProteinID:CAC01806.1 | InterPro:Chap_CCT_zeta |
| InterPro:Chaperone_TCP-1 | InterPro:Chaperonin_TCP-1_CS | InterPro:Cpn60/TCP-1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005832 | GO:GO:0006457 | GO:GO:0006458 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0044183 | GO:GO:0051082 | GO:GO:0061077 | InterPro:GROEL-like_equatorial_sf | InterPro:GroEL-like_apical_dom_sf | InterPro:IPR027409 |
| InterPro:IPR027410 | InterPro:IPR027413 | RefSeq:NP_197111.2 | ProteinID:OAO92229.1 | PFAM:PF00118 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00304 | ScanProsite:PS00750 | ScanProsite:PS00751 | PANTHER:PTHR11353 | PANTHER:PTHR11353:SF21 | UniProt:Q8L7N0 |
| SUPFAM:SSF48592 | SUPFAM:SSF52029 | SUPFAM:SSF54849 | InterPro:TCP-1-like_intermed_sf | TIGRFAMs:TIGR02347 | UniParc:UPI000009CC42 |
Description
CCT6BT-complex protein 1 subunit zeta 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7N0]
Coordinates
chr5:-:5247354..5251179
Molecular Weight (calculated)
58931.4 Da
IEP (calculated)
6.166
GRAVY (calculated)
-0.177
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRVLNPNA EVLNKSAALH MTINAAKGLQ DVLKSNLGPK GTIKMLVGGS GDIKLTKDGN TLLKEMQIQN PTAIMIARTA VAQDDISGDG TTSTVIFIGE
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDNFKTPV VMGDEVDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPEEAID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVKKIIEL KKKVCGDNDN FVVINQKGID
301: PPSLDLLARE GIIGLRRAKR RNMERLVLAC GGEAVNSVDD LTPESLGWAG LVYEHVLGEE KYTFVEQVKN PNSCTILIKG PNDHTIAQIK DAVRDGLRSV
401: KNTIEDECVV LGAGAFEVAA RQHLLNEVKK TVQGRAQLGV EAFANALLVV PKTLAENAGL DTQDVIISLT SEHDKGNVVG LNLQDGEPID PQLAGIFDNY
501: SVKRQLINSG PVIASQLLLV DEVIRAGRNM RKPTA
101: LMKQSERCID EGMHPRVLVD GFEIAKRATL QFLDNFKTPV VMGDEVDKEI LKMVARTTLR TKLYEGLADQ LTDIVVNSVL CIRKPEEAID LFMVEIMHMR
201: HKFDVDTRLV EGLVLDHGSR HPDMKRRAEN CHILTCNVSL EYEKSEINAG FFYSNAEQRE AMVTAERRSV DERVKKIIEL KKKVCGDNDN FVVINQKGID
301: PPSLDLLARE GIIGLRRAKR RNMERLVLAC GGEAVNSVDD LTPESLGWAG LVYEHVLGEE KYTFVEQVKN PNSCTILIKG PNDHTIAQIK DAVRDGLRSV
401: KNTIEDECVV LGAGAFEVAA RQHLLNEVKK TVQGRAQLGV EAFANALLVV PKTLAENAGL DTQDVIISLT SEHDKGNVVG LNLQDGEPID PQLAGIFDNY
501: SVKRQLINSG PVIASQLLLV DEVIRAGRNM RKPTA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.