Factsheet for Os02t0247200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0538000-01	Rice	cytosol, plasma membrane, plastid	93.92	94.09
GSMUA_Achr6P23290_001	Banana	cytosol	89.27	89.59
VIT_17s0000g08170.t01	Wine grape	cytosol	88.37	88.69
VIT_07s0130g00410.t01	Wine grape	cytosol	87.66	87.97
GSMUA_Achr5P09040_001	Banana	cytosol	87.3	87.61
PGSC0003DMT400060294	Potato	cytosol	86.4	87.03
Bra001174.1-P	Field mustard	cytosol	86.05	86.67
CDX74120	Canola	cytosol	86.05	86.67
Solyc05g056310.2.1	Tomato	extracellular, plastid	86.23	86.53
CDY18835	Canola	cytosol	85.33	85.95
KRH09301	Soybean	cytosol, endoplasmic reticulum, nucleus	85.15	85.92
KRH38791	Soybean	cytosol	85.15	85.92
Bra040242.1-P	Field mustard	cytosol	85.15	85.77
AT5G26360.1	Thale cress	cytosol	84.97	85.59
CDY49990	Canola	cytosol	85.87	84.81
KRG92501	Soybean	cytosol	84.08	84.38
Os06t0562600-01	Rice	cytosol, extracellular, plasma membrane	30.05	31.4
Os02t0332200-01	Rice	plasma membrane	28.62	29.96
Os04t0551800-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	28.98	29.72
Os10t0514600-01	Rice	plasma membrane	28.62	29.57
Os06t0687700-01	Rice	plasma membrane	15.03	27.81
Os03t0619400-01	Rice	plasma membrane	25.94	27.62
Os03t0804800-01	Rice	cytosol, extracellular, plasma membrane, plastid	26.48	27.11
Os05t0147400-01	Rice	cytosol, plasma membrane, plastid	25.22	26.36
Os05t0556700-01	Rice	cytosol, plasma membrane	13.77	23.48

Protein Annotations

Gene3D:1.10.560.10	MapMan:20.3.1.3	Gene3D:3.30.260.10	Gene3D:3.50.7.10	EntrezGene:4328872	EMBL:AK102024
ProteinID:BAD19953.1	ProteinID:BAF08344.1	ProteinID:BAS77882.1	InterPro:Chap_CCT_gamma	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS
InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005832
GO:GO:0006457	GO:GO:0006458	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0044183	GO:GO:0051082	GO:GO:0061077	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	EnsemblPlantsGene:Os02g0247200	EnsemblPlants:Os02t0247200-01	PFAM:PF00118	PRINTS:PR00304
ScanProsite:PS00750	ScanProsite:PS00751	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF24	UniProt:Q6K3R8
SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849	InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02344	UniParc:UPI00003759EB
RefSeq:XP_015622789.1	SEG:seg	:	:	:	:

Description

Similar to T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (Matricin) (mTRiC-P5). (Os02t0247200-01)

Coordinates

chr2:-:8326165..8343175

Molecular Weight (calculated)

60871.8 Da

IEP (calculated)

5.781

GRAVY (calculated)

-0.153

Length

559 amino acids

Sequence
(BLAST)

001: MALHAPVLVL KDSLKRESGT KVHHANIQAA KAVADIIRTT LGPQSMLKML LDAAGGIVVT NDGNCILREL DLAHPAAKSM IELSRTQDEE VGDGTTSVIV
101: LAGEMLHVAQ AFIDKNYHPT VICRAYTKAL DDALSVLDKI AIPVDVDDRV AMLGLVKSSI GTKFTGQFGD LIADLAIDAT TTAGVDLGQG IREVDIKKYI
201: KVEKVPGGQL EDSKVLKGVM INKDVVAPGK MRRKIVNPRI ILLDCPLEYK KGENQTNAEL MKEEDWQVML QMEEEYIENL CAQILKFKPD LVITEKGLSD
301: LAVHYLGKAG VSAIRRLRKT DNNRIAKACG AVIVNRPEEL QESDVGTGAG LFEVKKFGDE FFAFIVDCKD PKACTVLLRG ASKDVLNEVE RNLQDAMSMA
401: RNIWKNPKLL PGGGATELTV SATLKQKSSS VEGVEKWPYE AAALAFEAIP RTLLQNCGLN VIRTMTQLQG KHANGENAWV GIDGSSGDIV DMKERKIWDS
501: YSVKAQTFKT AIEAACMLLR IDDIVSGIKK KQAPGASSAP KQPQIEQEGD ADNEQMIPE

Best Arabidopsis Sequence Match ( AT5G26360.1 )
(BLAST)

001: MHAPVLVLSD SLKRESGSKV HHGNIQASKA VADIIRTTLG PRSMLKMLLD AGGGIVVTND GNAILRELDV AHPAAKSMIE LSRTQDEEVG DGTTSVIVLA
101: GEMLHVAEAF LEKNYHPTVI CRAYIKALED SIAVLDKIAM SIDINDRSQV LGLVKSCIGT KFTSQFGDLI ADLAIDATTT VGVDLGQGLR EVDIKKYIKV
201: EKVPGGQFED SEVLKGVMFN KDVVAPGKMK RKIVNPRIIL LDCPLEYKKG ENQTNAELVR EEDWEVLLKL EEEYIENICV QILKFKPDLV ITEKGLSDLA
301: CHYFSKAGVS AIRRLRKTDN NRIAKACGAV IVNRPDELQE SDIGTGAGLF EVKKIGDDFF SFIVDCKEPK ACTVLLRGPS KDFINEVERN LQDAMSVARN
401: IIKNPKLVPG GGATELTVSA TLKQKSATIE GIEKWPYEAA AIAFEAIPRT LAQNCGVNVI RTMTALQGKH ANGENAWTGI DGNTGAIADM KESKIWDSYN
501: VKAQTFKTAI EAACMLLRID DIVSGIKKKQ APGSGPSKPT IETEGDADNE QILPD

Arabidopsis Description

CCT3T-complex protein 1 subunit gamma [Source:UniProtKB/TrEMBL;Acc:A0A178UHF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.