Factsheet for Zm00001d007508_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007192_P001
Zm00001d007960_P001
Zm00001d018694_P002
Zm00001d053857_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G03960.1	Zm00001d007960_P001	AT1G24510.1	21798944
AT3G03960.1	Zm00001d018694_P002	AT1G24510.1	21798944
AT3G03960.1	Zm00001d053857_P002	AT3G11830.1	21798944
AT3G03960.1	Zm00001d007192_P001	AT5G16070.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09994	Sorghum	cytosol	93.89	98.18
Zm00001d052948_P001	Maize	cytosol, extracellular, mitochondrion	92.67	96.9
Os03t0804800-01	Rice	cytosol, extracellular, plasma membrane, plastid	90.05	94.51
HORVU4Hr1G040660.1	Barley	cytosol	86.04	91.3
TraesCS4B01G165400.1	Wheat	cytosol	85.86	91.11
TraesCS4A01G164900.2	Wheat	cytosol	85.86	90.44
TraesCS4D01G157300.1	Wheat	cytosol	84.47	90.13
GSMUA_Achr3P25570_001	Banana	cytosol	82.55	86.95
GSMUA_Achr8P04580_001	Banana	cytosol	82.55	86.95
KRH08492	Soybean	cytosol, endoplasmic reticulum, nucleus	82.2	86.42
VIT_08s0007g07460.t01	Wine grape	cytosol	82.02	86.24
KRH70153	Soybean	nucleus	82.02	86.24
PGSC0003DMT400017609	Potato	cytosol	81.15	85.95
Solyc01g088080.2.1	Tomato	nucleus	81.15	85.95
TraesCS6B01G010900.1	Wheat	mitochondrion, plastid	78.53	84.75
TraesCS6D01G008000.1	Wheat	cytosol	81.33	81.75
Bra036422.1-P	Field mustard	cytosol	77.31	81.43
CDY29973	Canola	cytosol	76.96	81.07
CDY21153	Canola	cytosol	76.79	80.88
CDX92056	Canola	cytosol	77.14	80.66
AT3G03960.1	Thale cress	cytosol	76.79	80.15
Bra001094.1-P	Field mustard	cytosol	76.61	80.11
CDX74202	Canola	cytosol, plasma membrane	76.61	80.11
Bra031959.1-P	Field mustard	cytosol	75.74	79.78
CDY42892	Canola	cytosol	75.57	79.6
CDY50868	Canola	cytosol	75.57	79.6
CDY50320	Canola	cytosol	34.9	75.76
CDX79329	Canola	cytosol	34.21	74.24
Zm00001d018349_P001	Maize	cytosol	26.18	27.52
Zm00001d040257_P001	Maize	cytosol	24.96	27.24
Zm00001d052056_P005	Maize	plasma membrane	25.83	27.16
Zm00001d051742_P001	Maize	plastid	25.13	26.92
Zm00001d008369_P001	Maize	cytosol, nucleus	24.61	26.86
Zm00001d028183_P002	Maize	cytosol	26.0	26.7
Zm00001d027371_P001	Maize	plasma membrane	24.43	26.17
Zm00001d053857_P002	Maize	cytosol	24.61	25.18
Zm00001d018694_P002	Maize	cytosol	23.39	24.45
Zm00001d007960_P001	Maize	cytosol	23.39	24.45
Zm00001d007192_P001	Maize	cytosol	22.69	24.12
Zm00001d053553_P002	Maize	cytosol	25.83	22.7
Zm00001d040688_P001	Maize	cytosol	9.08	18.51
Zm00001d052882_P001	Maize	plastid	11.17	12.62

Protein Annotations

EntrezGene:100382493	MapMan:20.3.1.8	UniProt:A0A1D6F6Y9	InterPro:Chap_CCT_theta	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS
ncoils:Coil	InterPro:Cpn60/TCP-1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:GroEL-like_apical_dom_sf	InterPro:IPR027409
InterPro:IPR027410	InterPro:IPR027413	ProteinID:ONM27006.1	PFAM:PF00118	PRINTS:PR00304	ScanProsite:PS00750
ScanProsite:PS00751	PANTHER:PTHR11353	PANTHER:PTHR11353:SF78	SUPFAM:SSF48592	SUPFAM:SSF52029	SUPFAM:SSF54849
InterPro:TCP-1-like_intermed_sf	TIGRFAMs:TIGR02346	UniParc:UPI000844BB73	EnsemblPlantsGene:Zm00001d007508	EnsemblPlants:Zm00001d007508_P005	EnsemblPlants:Zm00001d007508_T005

Description

T-complex protein 1 subunit theta

Coordinates

chr2:+:233472727..233477594

Molecular Weight (calculated)

61808.6 Da

IEP (calculated)

5.444

GRAVY (calculated)

-0.019

Length

573 amino acids

Sequence
(BLAST)

001: MVGFGSMAGY GIQSMLKEGH RHLSGLEEAV LKNIDACREL SAITRTSLGP NGMNKMVINH LDKLFVTNDA ATIVNELEVQ HPAAKILVLA GRAQQEEIGD
101: GANLTISFAG ELLEKAEELI RMGLHPSEII IGYTKAINKT IEILEDLVEK GSENMDVRNK EDVVLRMRSA VASKQFGQED IMCPLVADAC IQVCPKNPAN
201: FNVDNVRVAK LLGGGLHNSS VVRGMVLKND AVGSIKRVEK AKVSQNATLH SHCTPVKIAV FAGGVDTSAT ETKGTVLIHS AEQLENYAKT EEAKVEELIK
301: AVADSGAKVI VSGAAVGDMA LHFCERYKLM VLKISSKFEL RRFCRTTGAV AILKLSQPNA DELGYADSVS VEEIGGTRVI VIKNEEGGNS VATVVLRGST
401: DSILDDLERA VDDGVNTYKS MCRDSRIIPG AAATEIELAK RLKEFSLKET GLDQYAVAKF AESFEMVPRT LAENAGLSAM DVISSLYAEH ASGNVKVGID
501: LEEGACKDIT TLKIWDLYVT KFLTSLILLY RFFALKYSAD AACTVLRVDQ IIMAKPAGGP RRDAQPGGGM DED

Best Arabidopsis Sequence Match ( AT3G03960.1 )
(BLAST)

001: MVGMSMQPYG IQSMLKEGYR HLSGLDEAVI KNIEACKELS TITRTSLGPN GMNKMVINHL DKLFVTNDAA TIVNELEIQH PAAKLLVLAA KAQQEEIGDG
101: ANLTISFAGE LLQNAEELIR MGLHPSEIIS GYTKAVSKAV EILEQLVETG SETMDVRNKD EVISRMRAAV ASKQFGQEEI ICSLVTDACI QVCPKNPTNF
201: NVDNVRVSKL LGGGLHNSCI VRGMVLKSDA VGSIKRMEKA KVAVFAGGVD TTATETKGTV LIHSAEQLEN YAKTEEAKVE ELIKAVAESG AKVIVSGGSI
301: GEMALHFCER YKIMVLKISS KFELRRFCRT AGAVAHLKLS RPSPEDLGYV DSISVEEIGG VTVTIARNEE GGNSISTVVL RGSTDSILDD LERAVDDGVN
401: TYKAMCRDSR IVPGAAATEI ELAQRLKEYA NAEIGLDKYA ITKYAESFEF VPKTLADNAG LNAMEIIAAL YTGHGSGNTK LGIDLEEGAC KDVSETKVWD
501: LFATKLFALK YASDAACTVL RVDQIIMAKP AGGPRRDAAQ AAGAGAEED

Arabidopsis Description

CCT8T-complex protein 1 subunit theta [Source:UniProtKB/Swiss-Prot;Acc:Q94K05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.