Factsheet for TraesCS3B01G595300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72126	Canola	cytosol	69.63	44.34
CDY72106	Canola	cytosol	69.63	44.34
PGSC0003DMT400019727	Potato	cytosol	42.96	41.73
TraesCS5B01G341900.1	Wheat	cytosol	82.22	20.9
Solyc11g069000.1.1	Tomato	extracellular	74.81	19.2
GSMUA_Achr2P01800_001	Banana	cytosol	74.81	19.17
VIT_18s0001g00480.t01	Wine grape	cytosol	74.07	18.9
Bra002337.1-P	Field mustard	cytosol	73.33	18.79
CDY09085	Canola	cytosol	73.33	18.79
CDX70950	Canola	cytosol	73.33	18.79
CDY16573	Canola	cytosol	73.33	18.79
AT5G20890.1	Thale cress	cytosol	72.59	18.6
CDX92428	Canola	cytosol	72.59	18.6
GSMUA_Achr3P24440_001	Banana	peroxisome	75.56	18.55
KRH25193	Soybean	nucleus	71.85	18.41
KRH30467	Soybean	nucleus	71.85	18.41
TraesCS4B01G250200.1	Wheat	cytosol	65.19	17.6
Bra020134.1-P	Field mustard	cytosol	65.93	17.55
Bra006584.1-P	Field mustard	cytosol	73.33	13.24
CDX88835	Canola	mitochondrion	73.33	13.03
TraesCS1B01G218800.1	Wheat	cytosol	35.56	10.17
TraesCS1B01G227600.1	Wheat	cytosol	39.26	9.91
TraesCS7B01G269300.2	Wheat	cytosol	37.78	9.53
TraesCS7B01G124100.1	Wheat	cytosol, golgi, unclear	37.04	9.17
TraesCS7B01G068100.1	Wheat	golgi, unclear	34.81	8.8
TraesCS6B01G159800.1	Wheat	cytosol	35.56	8.62
TraesCS7B01G237000.1	Wheat	cytosol	31.85	7.61
TraesCS4B01G165400.1	Wheat	cytosol	28.89	7.22
TraesCS6B01G010900.1	Wheat	mitochondrion, plastid	26.67	6.78
TraesCS6B01G391500.1	Wheat	mitochondrion	25.19	6.51
CDY71043	Canola	cytosol	3.7	1.59

Protein Annotations

Gene3D:1.10.560.10	MapMan:35.1	InterPro:Chap_CCT_beta	InterPro:Chaperone_TCP-1	InterPro:Chaperonin_TCP-1_CS	InterPro:Cpn60/TCP-1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:GROEL-like_equatorial_sf	InterPro:IPR027413	PFAM:PF00118
PRINTS:PR00304	ScanProsite:PS00995	PANTHER:PTHR11353	PANTHER:PTHR11353:SF23	SUPFAM:SSF48592	EnsemblPlantsGene:TraesCS3B01G595300
EnsemblPlants:TraesCS3B01G595300.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:818290019..818294508

Molecular Weight (calculated)

14563.7 Da

IEP (calculated)

10.320

GRAVY (calculated)

-0.413

Length

135 amino acids

Sequence
(BLAST)

001: MERVLKDDAI QEKAERARMA SFVSAMANAD LAKTTSGPKG MDNILQSTGR GPSVTITNDD APILKSLQID NPAAKVLVDI SKVQDDEVGD GTASVVILAG
101: KLLREAQKLV NMKNHPMTII ADKPKKTKPF KRGHK

Best Arabidopsis Sequence Match ( AT5G20890.1 )
(BLAST)

001: MPIDKIFKDD ASEEKGERAR MASFVGAMAI SDLVKSTLGP KGMDKILQST GRGHAVTVTN DGATILKSLH IDNPAAKVLV DISKVQDDEV GDGTTSVVVL
101: AGELLREAEK LVASKIHPMT IIAGYRMASE CARNALLKRV IDNKDNAEKF RSDLLKIAMT TLCSKILSQD KEHFAEMAVD AVFRLKGSTN LEAIQIIKKP
201: GGSLKDSFLD EGFILDKKIG IGQPKRIENA NILVANTAMD TDKVKIYGAR VRVDSMTKVA EIEGAEKEKM KDKVKKIIGH GINCFVNRQL IYNFPEELFA
301: DAGILAIEHA DFEGIERLGL VTGGEIASTF DNPESVKLGH CKLIEEIMIG EDKLIHFSGC EMGQACSIVL RGASHHVLDE AERSLHDALC VLSQTVNDTR
401: VLLGGGWPEM VMAKEVDELA RKTAGKKSHA IEAFSRALVA IPTTIADNAG LDSAELVAQL RAEHHTEGCN AGIDVITGAV GDMEERGIYE AFKVKQAVLL
501: SATEASEMIL RVDEIITCAP RRREDRM

Arabidopsis Description

CCT2T-complex protein 1 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q940P8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.