Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G353500.1 | Wheat | plastid | 82.27 | 85.93 |
| TraesCS4D01G341200.1 | Wheat | nucleus, plastid | 81.09 | 66.99 |
| TraesCS4B01G346200.2 | Wheat | nucleus, plastid | 80.61 | 66.47 |
| Zm00001d027430_P001 | Maize | plastid | 75.18 | 61.87 |
| Os03t0123300-01 | Rice | plastid | 76.12 | 61.57 |
| Zm00001d048472_P001 | Maize | nucleus, plastid | 75.18 | 61.15 |
| HORVU4Hr1G084710.1 | Barley | cytosol, mitochondrion | 80.38 | 60.39 |
| VIT_02s0025g04680.t01 | Wine grape | cytosol, nucleus, plastid | 63.59 | 59.51 |
| KRH57275 | Soybean | nucleus | 62.65 | 57.73 |
| GSMUA_Achr11P... | Banana | plastid | 64.07 | 55.76 |
| CDY10820 | Canola | nucleus, plastid | 61.7 | 55.53 |
| CDY41283 | Canola | nucleus, plastid | 61.7 | 55.41 |
| Bra013655.1-P | Field mustard | nucleus, plastid | 61.7 | 55.41 |
| PGSC0003DMT400058525 | Potato | nucleus, plastid | 62.41 | 55.23 |
| AT4G11920.1 | Thale cress | nucleus | 61.94 | 55.16 |
| AT4G22910.1 | Thale cress | nucleus, plastid | 62.88 | 55.07 |
| Bra019347.1-P | Field mustard | nucleus, plastid | 60.99 | 54.89 |
| KRH77460 | Soybean | nucleus, plastid | 59.34 | 54.68 |
| Solyc08g080080.2.1 | Tomato | nucleus, plastid | 62.17 | 54.68 |
| CDX94473 | Canola | nucleus | 60.99 | 54.66 |
| Bra029426.1-P | Field mustard | nucleus | 60.05 | 53.47 |
| CDX86737 | Canola | nucleus | 60.05 | 53.47 |
| Bra000756.1-P | Field mustard | nucleus | 59.1 | 53.19 |
| GSMUA_Achr11P... | Banana | plastid | 61.47 | 52.95 |
| CDY51550 | Canola | nucleus | 56.5 | 52.64 |
| CDX90811 | Canola | nucleus | 55.79 | 52.1 |
| Solyc12g056490.1.1 | Tomato | nucleus, plastid | 59.1 | 51.98 |
| PGSC0003DMT400027994 | Potato | nucleus, plastid | 58.87 | 51.23 |
| KRH04001 | Soybean | mitochondrion | 62.88 | 50.57 |
| TraesCS3B01G595600.1 | Wheat | plastid | 53.9 | 47.01 |
| KRH27985 | Soybean | nucleus, plastid | 50.12 | 46.7 |
| CDX94136 | Canola | nucleus, plastid | 41.84 | 46.34 |
| CDY71640 | Canola | nucleus, plastid | 26.24 | 46.25 |
| OQU93351 | Sorghum | nucleus | 75.18 | 45.69 |
| TraesCS2B01G461400.1 | Wheat | nucleus | 36.41 | 31.49 |
| TraesCS5B01G272800.1 | Wheat | plastid | 34.75 | 31.41 |
| TraesCS6B01G296200.1 | Wheat | plastid | 34.99 | 31.22 |
| TraesCS5B01G185900.1 | Wheat | mitochondrion, nucleus | 34.52 | 30.67 |
| TraesCS2B01G461500.1 | Wheat | mitochondrion | 0.71 | 0.73 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF12894 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SUPFAM:SSF50998 | EnsemblPlantsGene:TraesCS1B01G166800 |
| EnsemblPlants:TraesCS1B01G166800.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:294925637..294966263
Molecular Weight (calculated)
46025.6 Da
IEP (calculated)
8.664
GRAVY (calculated)
-0.139
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRVAADDE QQFTMHVVVD THRIDRFIPS RTGSNLALFD LAPAPSSSAS GSAAPPSPYC VLLRAALFGP DTPDRLASSA GASSSSAASP VGSPAGGNIF
101: RFKAEVPRNA KRALFVGGDD QDLLFPGIFT PKGSGPRKIP RSPYKIPSFL MIFLYKERIS RECDSPACCF CQVLDAPALQ DDFYLNLVDW SSHNVLSVRL
201: GNCVYLWNAC SSKVTKLCDL GADDTVCSVS WAQRGTHLAV GTNQGTVQIW DATRCKRMRT MESHRMRVGA LAWNSSLLSS GSRDKNILHH DLHGLLASGG
301: GTADRCIRFW NTTTNTHLSS MDTGSQVCNL VWSKNVNELV STHGYSQNQI IVWRYPTMSK LATLTGHTFR VLYLAISPDG QTIVTGAGDE TLRFWNVFPS
401: PKSQSSDSLS SIGATSFVRS YIR
101: RFKAEVPRNA KRALFVGGDD QDLLFPGIFT PKGSGPRKIP RSPYKIPSFL MIFLYKERIS RECDSPACCF CQVLDAPALQ DDFYLNLVDW SSHNVLSVRL
201: GNCVYLWNAC SSKVTKLCDL GADDTVCSVS WAQRGTHLAV GTNQGTVQIW DATRCKRMRT MESHRMRVGA LAWNSSLLSS GSRDKNILHH DLHGLLASGG
301: GTADRCIRFW NTTTNTHLSS MDTGSQVCNL VWSKNVNELV STHGYSQNQI IVWRYPTMSK LATLTGHTFR VLYLAISPDG QTIVTGAGDE TLRFWNVFPS
401: PKSQSSDSLS SIGATSFVRS YIR
001: MEEDESTTPK KKSDSQLNLP PSMNRPTVSL ESRINRLIDS NHYHSPSKPI YSDRFIPSRS GSNFALFDLA SSSPNKKDGK EDGAGSYASL LKTALFGPVT
101: PEKSDVVNGF SPSGNIFRFK TETQRSLNLY PPFDSDVVSG VSPSPVKSPR KILRSPYKVL DAPALQDDFY LNLVDWSAQN VLAVGLGNCV YLWNACSSKV
201: TKLCDLGVDE TVCSVGWALR GTHLAIGTSS GTVQIWDVLR CKNIRTMEGH RLRVGALAWS SSVLSSGSRD KSILQRDIRT QEDHVSKLKG HKSEICGLKW
301: SSDNRELASG GNDNKLFVWN QHSTQPVLRF CEHAAAVKAI AWSPHHFGLL ASGGGTADRC IRFWNTTTNT HLNCVDTNSQ VCNLVWSKNV NELVSTHGYS
401: QNQIIVWKYP TMSKLATLTG HSYRVLYLAV SPDGQTIVTG AGDETLRFWN VFPSPKSQSR ESEIGALSFG RTTIR
101: PEKSDVVNGF SPSGNIFRFK TETQRSLNLY PPFDSDVVSG VSPSPVKSPR KILRSPYKVL DAPALQDDFY LNLVDWSAQN VLAVGLGNCV YLWNACSSKV
201: TKLCDLGVDE TVCSVGWALR GTHLAIGTSS GTVQIWDVLR CKNIRTMEGH RLRVGALAWS SSVLSSGSRD KSILQRDIRT QEDHVSKLKG HKSEICGLKW
301: SSDNRELASG GNDNKLFVWN QHSTQPVLRF CEHAAAVKAI AWSPHHFGLL ASGGGTADRC IRFWNTTTNT HLNCVDTNSQ VCNLVWSKNV NELVSTHGYS
401: QNQIIVWKYP TMSKLATLTG HSYRVLYLAV SPDGQTIVTG AGDETLRFWN VFPSPKSQSR ESEIGALSFG RTTIR
Arabidopsis Description
FZR1Protein FIZZY-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.