Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94473 | Canola | nucleus | 85.26 | 85.81 |
| Bra029426.1-P | Field mustard | nucleus | 85.05 | 85.05 |
| CDX86737 | Canola | nucleus | 85.05 | 85.05 |
| CDY51550 | Canola | nucleus | 81.05 | 84.8 |
| CDX90811 | Canola | nucleus | 80.42 | 84.33 |
| Bra000756.1-P | Field mustard | nucleus | 83.16 | 84.04 |
| AT4G22910.1 | Thale cress | nucleus, plastid | 81.26 | 79.92 |
| VIT_02s0025g04680.t01 | Wine grape | cytosol, nucleus, plastid | 72.21 | 75.89 |
| KRH57275 | Soybean | nucleus | 72.84 | 75.38 |
| KRH77460 | Soybean | nucleus, plastid | 69.68 | 72.11 |
| GSMUA_Achr11P... | Banana | plastid | 69.47 | 67.9 |
| KRH04001 | Soybean | mitochondrion | 73.47 | 66.35 |
| Zm00001d027430_P001 | Maize | plastid | 69.68 | 64.4 |
| KRH27985 | Soybean | nucleus, plastid | 61.05 | 63.88 |
| Zm00001d048472_P001 | Maize | nucleus, plastid | 69.68 | 63.65 |
| GSMUA_Achr11P... | Banana | plastid | 65.68 | 63.54 |
| TraesCS4D01G341200.1 | Wheat | nucleus, plastid | 68.21 | 63.28 |
| TraesCS4B01G346200.2 | Wheat | nucleus, plastid | 68.21 | 63.16 |
| Os03t0123300-01 | Rice | plastid | 69.05 | 62.72 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 55.16 | 61.94 |
| TraesCS7B01G353500.1 | Wheat | plastid | 52.63 | 61.73 |
| AT5G13840.1 | Thale cress | plastid | 60.63 | 59.88 |
| HORVU4Hr1G084710.1 | Barley | cytosol, mitochondrion | 68.63 | 57.9 |
| OQU93351 | Sorghum | nucleus | 70.11 | 47.84 |
| AT4G33260.1 | Thale cress | nucleus | 38.32 | 40.72 |
| AT4G33270.1 | Thale cress | nucleus | 38.32 | 39.82 |
| AT5G27570.1 | Thale cress | nucleus | 37.26 | 39.33 |
| AT5G27080.1 | Thale cress | nucleus | 35.79 | 38.46 |
| AT5G26900.1 | Thale cress | nucleus | 35.79 | 38.29 |
| AT5G27945.1 | Thale cress | cytosol, plastid, vacuole | 32.0 | 35.51 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | EntrezGene:826799 | ProteinID:AEE83070.1 | ArrayExpress:AT4G11920 | EnsemblPlantsGene:AT4G11920 |
| RefSeq:AT4G11920 | TAIR:AT4G11920 | RefSeq:AT4G11920-TAIR-G | EnsemblPlants:AT4G11920.1 | TAIR:AT4G11920.1 | EMBL:AY063875 |
| EMBL:AY091235 | InterPro:Apc4_WD40_dom | Unigene:At.27160 | ProteinID:CAB44330.1 | ProteinID:CAB78235.1 | Symbol:CCS52A2 |
| InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008361 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010492 | GO:GO:0010997 | GO:GO:0016043 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0032877 | GO:GO:0051301 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | RefSeq:NP_192929.2 | PFAM:PF00400 | PFAM:PF12894 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 |
| PANTHER:PTHR19918:SF31 | UniProt:Q8VZS9 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000009CBB7 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
FZR1Protein FIZZY-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS9]
Coordinates
chr4:-:7160243..7163427
Molecular Weight (calculated)
52332.7 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.380
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDESTTPK KKSDSQLNLP PSMNRPTVSL ESRINRLIDS NHYHSPSKPI YSDRFIPSRS GSNFALFDLA SSSPNKKDGK EDGAGSYASL LKTALFGPVT
101: PEKSDVVNGF SPSGNIFRFK TETQRSLNLY PPFDSDVVSG VSPSPVKSPR KILRSPYKVL DAPALQDDFY LNLVDWSAQN VLAVGLGNCV YLWNACSSKV
201: TKLCDLGVDE TVCSVGWALR GTHLAIGTSS GTVQIWDVLR CKNIRTMEGH RLRVGALAWS SSVLSSGSRD KSILQRDIRT QEDHVSKLKG HKSEICGLKW
301: SSDNRELASG GNDNKLFVWN QHSTQPVLRF CEHAAAVKAI AWSPHHFGLL ASGGGTADRC IRFWNTTTNT HLNCVDTNSQ VCNLVWSKNV NELVSTHGYS
401: QNQIIVWKYP TMSKLATLTG HSYRVLYLAV SPDGQTIVTG AGDETLRFWN VFPSPKSQSR ESEIGALSFG RTTIR
101: PEKSDVVNGF SPSGNIFRFK TETQRSLNLY PPFDSDVVSG VSPSPVKSPR KILRSPYKVL DAPALQDDFY LNLVDWSAQN VLAVGLGNCV YLWNACSSKV
201: TKLCDLGVDE TVCSVGWALR GTHLAIGTSS GTVQIWDVLR CKNIRTMEGH RLRVGALAWS SSVLSSGSRD KSILQRDIRT QEDHVSKLKG HKSEICGLKW
301: SSDNRELASG GNDNKLFVWN QHSTQPVLRF CEHAAAVKAI AWSPHHFGLL ASGGGTADRC IRFWNTTTNT HLNCVDTNSQ VCNLVWSKNV NELVSTHGYS
401: QNQIIVWKYP TMSKLATLTG HSYRVLYLAV SPDGQTIVTG AGDETLRFWN VFPSPKSQSR ESEIGALSFG RTTIR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.