Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G084710.1 | Barley | cytosol, mitochondrion | 93.16 | 84.72 |
| Zm00001d027430_P001 | Maize | plastid | 82.42 | 82.1 |
| Zm00001d048472_P001 | Maize | nucleus, plastid | 82.81 | 81.54 |
| Os03t0123300-01 | Rice | plastid | 83.2 | 81.45 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 66.99 | 81.09 |
| TraesCS7B01G353500.1 | Wheat | plastid | 63.87 | 80.74 |
| VIT_02s0025g04680.t01 | Wine grape | cytosol, nucleus, plastid | 64.26 | 72.79 |
| KRH57275 | Soybean | nucleus | 65.23 | 72.77 |
| GSMUA_Achr11P... | Banana | plastid | 68.95 | 72.63 |
| Bra019347.1-P | Field mustard | nucleus, plastid | 64.26 | 70.0 |
| CDY10820 | Canola | nucleus, plastid | 64.06 | 69.79 |
| CDY41283 | Canola | nucleus, plastid | 64.06 | 69.64 |
| Bra013655.1-P | Field mustard | nucleus, plastid | 64.06 | 69.64 |
| AT4G22910.1 | Thale cress | nucleus, plastid | 65.23 | 69.15 |
| PGSC0003DMT400058525 | Potato | nucleus, plastid | 64.26 | 68.83 |
| CDX94473 | Canola | nucleus | 63.28 | 68.64 |
| KRH77460 | Soybean | nucleus, plastid | 61.52 | 68.63 |
| AT4G11920.1 | Thale cress | nucleus | 63.28 | 68.21 |
| Solyc08g080080.2.1 | Tomato | nucleus, plastid | 64.06 | 68.19 |
| CDX86737 | Canola | nucleus | 62.7 | 67.58 |
| Bra029426.1-P | Field mustard | nucleus | 62.7 | 67.58 |
| Bra000756.1-P | Field mustard | nucleus | 61.72 | 67.23 |
| GSMUA_Achr11P... | Banana | plastid | 63.87 | 66.6 |
| CDY51550 | Canola | nucleus | 58.98 | 66.52 |
| CDX90811 | Canola | nucleus | 58.59 | 66.23 |
| Solyc12g056490.1.1 | Tomato | nucleus, plastid | 61.91 | 65.9 |
| PGSC0003DMT400027994 | Potato | nucleus, plastid | 61.52 | 64.81 |
| CDX94136 | Canola | nucleus, plastid | 48.24 | 64.66 |
| KRH04001 | Soybean | mitochondrion | 65.62 | 63.88 |
| OQU93351 | Sorghum | nucleus | 84.38 | 62.07 |
| KRH27985 | Soybean | nucleus, plastid | 52.93 | 59.69 |
| TraesCS3D01G533000.1 | Wheat | plastid | 56.25 | 59.63 |
| CDY71640 | Canola | nucleus, plastid | 23.63 | 50.42 |
| TraesCS2D01G438800.1 | Wheat | nucleus | 37.89 | 39.84 |
| TraesCS5D01G280600.1 | Wheat | plastid | 36.13 | 39.53 |
| TraesCS6D01G246000.1 | Wheat | plastid | 36.13 | 38.95 |
| TraesCS5D01G193100.1 | Wheat | mitochondrion, nucleus | 34.96 | 37.6 |
| TraesCS2D01G118700.1 | Wheat | cytosol | 8.59 | 20.95 |
| TraesCS2D01G438900.1 | Wheat | mitochondrion | 0.78 | 0.98 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF12894 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS4D01G341200 | EnsemblPlants:TraesCS4D01G341200.1 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | TIGR:cd00200 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:498032307..498035847
Molecular Weight (calculated)
54687.9 Da
IEP (calculated)
9.452
GRAVY (calculated)
-0.327
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHQHQQPP SPADANSKPP TPSSTHASRH ASGAALSWPP SSAEGAPARG PASSSASSAP ATPASRTVYS DRFIPSRTGS NLALFDLAPA PSSSSGSAAA
101: AAPPSPYCAL LRAALFGPDT PDRLASSAGA SSSSAASPVG SPAGGNIFRF KAEVPRNAKR ALFAGGDDQD LLFPGIFTPK GSGPRKIPRS PYKVLDAPAL
201: QDDFYLNLVD WSSHNVLSVG LGNCVYLWNA CSSKVTKLCD LGADDTVCSV SWAQRGTHLA VGTNQGTVQI WDATRCKRMR TMESHRMRVG ALAWNSSLLS
301: SGSRDKNILH HDLRAPEDYV SKLTGHKSEV CGLKWSYDNR QLASGGNDNK LFVWNQHSVQ PVLKYTEHTA AVKAIAWSPH LHGLLASGGG TADRCIRFWN
401: TTTNTHLSSM DTGSQVCNLV WSKNVNELVS THGYSQNQII VWRYPTMSKL ATLTGHTFRV LYLAISPDGQ TIVTGAGDET LRFWNVFPSP KSQSSDSLSS
501: IGATSFVRSY IR
101: AAPPSPYCAL LRAALFGPDT PDRLASSAGA SSSSAASPVG SPAGGNIFRF KAEVPRNAKR ALFAGGDDQD LLFPGIFTPK GSGPRKIPRS PYKVLDAPAL
201: QDDFYLNLVD WSSHNVLSVG LGNCVYLWNA CSSKVTKLCD LGADDTVCSV SWAQRGTHLA VGTNQGTVQI WDATRCKRMR TMESHRMRVG ALAWNSSLLS
301: SGSRDKNILH HDLRAPEDYV SKLTGHKSEV CGLKWSYDNR QLASGGNDNK LFVWNQHSVQ PVLKYTEHTA AVKAIAWSPH LHGLLASGGG TADRCIRFWN
401: TTTNTHLSSM DTGSQVCNLV WSKNVNELVS THGYSQNQII VWRYPTMSKL ATLTGHTFRV LYLAISPDGQ TIVTGAGDET LRFWNVFPSP KSQSSDSLSS
501: IGATSFVRSY IR
001: MEEEDPTASN VITNSNSSSM RNLSPAMNTP VVSLESRINR LINANQSQSP SPSSLSRSIY SDRFIPSRSG SNFALFDLSP SPSKDGKEDG AGSYATLLRA
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
Arabidopsis Description
FZR2FZR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.