Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G461500.1 | Wheat | mitochondrion | 99.26 | 99.02 |
| CDX98239 | Canola | nucleus | 0.49 | 1.49 |
| KRH08491 | Soybean | cytosol | 0.49 | 1.43 |
| AT5G26900.1 | Thale cress | nucleus | 1.23 | 1.13 |
| AT4G33260.1 | Thale cress | nucleus | 1.23 | 1.12 |
| Solyc08g005420.2.1 | Tomato | nucleus | 1.23 | 1.12 |
| PGSC0003DMT400047585 | Potato | nucleus | 1.23 | 1.12 |
| VIT_15s0107g00320.t01 | Wine grape | nucleus | 1.23 | 1.11 |
| VIT_16s0039g02510.t01 | Wine grape | nucleus | 1.23 | 1.11 |
| Solyc03g096870.2.1 | Tomato | nucleus | 1.23 | 1.1 |
| PGSC0003DMT400001467 | Potato | nucleus | 1.23 | 1.1 |
| Solyc06g072830.2.1 | Tomato | nucleus, plastid | 1.23 | 1.1 |
| PGSC0003DMT400069533 | Potato | nucleus, plastid | 1.23 | 1.1 |
| AT4G33270.1 | Thale cress | nucleus | 1.23 | 1.09 |
| TraesCS5D01G280600.1 | Wheat | plastid | 1.23 | 1.07 |
| TraesCS6D01G246000.1 | Wheat | plastid | 1.23 | 1.05 |
| TraesCS5D01G193100.1 | Wheat | mitochondrion, nucleus | 1.23 | 1.05 |
| TraesCS2D01G438800.1 | Wheat | nucleus | 1.23 | 1.03 |
| TraesCS2B01G461400.1 | Wheat | nucleus | 1.23 | 1.02 |
| Os04t0599800-01 | Rice | nucleus | 1.23 | 0.99 |
| TraesCS2D01G118700.1 | Wheat | cytosol | 0.49 | 0.95 |
| Bra008327.1-P | Field mustard | cytosol, mitochondrion | 0.98 | 0.93 |
| Bra005544.1-P | Field mustard | nucleus | 0.98 | 0.91 |
| AT5G27080.1 | Thale cress | nucleus | 0.98 | 0.9 |
| AT5G27570.1 | Thale cress | nucleus | 0.98 | 0.89 |
| TraesCS4D01G341200.1 | Wheat | nucleus, plastid | 0.98 | 0.78 |
| Bra037011.1-P | Field mustard | nucleus | 0.74 | 0.72 |
| AT5G27945.1 | Thale cress | cytosol, plastid, vacuole | 0.74 | 0.7 |
| Bra011430.1-P | Field mustard | cytosol | 1.23 | 0.7 |
| TraesCS3D01G533000.1 | Wheat | plastid | 0.74 | 0.62 |
| TraesCS2A01G440000.2 | Wheat | nucleus | 0.74 | 0.61 |
| Bra034555.1-P | Field mustard | nucleus | 0.49 | 0.53 |
| VIT_05s0029g01120.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_05s0102g00550.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_05s0102g00640.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_05s0102g00680.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_16s0039g02620.t01 | Wine grape | cytosol | 0.25 | 0.43 |
| GSMUA_Achr2P19120_001 | Banana | cytosol | 0.25 | 0.37 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G438900.1 | EnsemblPlantsGene:TraesCS2D01G438900 | Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | InterPro:Cbl_biosynth_CobW-like_C | InterPro:CobW-likC_sf |
| InterPro:CobW/HypB/UreG_dom | InterPro:IPR036627 | InterPro:P-loop_NTPase | PANTHER:PTHR13748 | PANTHER:PTHR13748:SF40 | PFAM:PF02492 |
| PFAM:PF07683 | SEG:seg | SMART:SM00833 | SUPFAM:SSF52540 | SUPFAM:SSF90002 | MapMan:15.6.1.2.3.7 |
Description
No Description!
Coordinates
chr2D:-:548083904..548086620
Molecular Weight (calculated)
44804.9 Da
IEP (calculated)
6.131
GRAVY (calculated)
-0.074
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAAARL LLPRATRAAA SSSALLHRPL DSFSRCFRSL GPPLPRPPPT VFQRHLSDAA FDAQALDNRV PATVITGFLG SGKTTLLNHI LTSQHGKRIA
101: VIENEFGEVD IDSSLVANHS SVAEDIVMVN NGCLCCTVRG DLVKMLLKLV KQKGDKFDHI VIETTGLAKP GPVIETFCSD ELVSKYVKLD GVVTLVDCKH
201: AMQHLNEVKA RWVVNEAVEQ VAYADRIILN KTDLVDDTEL EVLTNKIKLI NGMAQMKKAM FGDVDMDFVL GIGGYDLDRI EAAVQLNENK ETGHCHLGHE
301: HGHHHDHVHD AAVTSVSIVS EGLLDLDEVN DWLERLVDEK GEDLYRLKGV ISVNESTGRF VFQGVHSMLE GCPAKPWEDD EKRISKLVFI GRNLDEAALR
401: KAFKGCLL
101: VIENEFGEVD IDSSLVANHS SVAEDIVMVN NGCLCCTVRG DLVKMLLKLV KQKGDKFDHI VIETTGLAKP GPVIETFCSD ELVSKYVKLD GVVTLVDCKH
201: AMQHLNEVKA RWVVNEAVEQ VAYADRIILN KTDLVDDTEL EVLTNKIKLI NGMAQMKKAM FGDVDMDFVL GIGGYDLDRI EAAVQLNENK ETGHCHLGHE
301: HGHHHDHVHD AAVTSVSIVS EGLLDLDEVN DWLERLVDEK GEDLYRLKGV ISVNESTGRF VFQGVHSMLE GCPAKPWEDD EKRISKLVFI GRNLDEAALR
401: KAFKGCLL
001: MATLSTLEIA TTFLSFTAPR SSAAFNYRFS SAAVSVLSRP RATTVSVRTT PSFFYSPVVR RQRFSSVSAS ATQTEDSDVT TKIPPDNRIP ATIITGFLGS
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
101: GKTTLLNHIL TRDHGKRIAV IENEFGEVDI DGSLVASKSI GAEDIVMLNN GCLCCTVRGD LVRMIGELVN TKKGKFDHIV IETTGLANPA PIIQTFYAEE
201: EIFNDVKLDG VVTLVDAKHA RLHLDEVKPE GVVNEAVEQI AYADRIIVNK TDLVGEAELG SVVQRIKTIN SMAQMTRTKY GNVDLDYVLG IGGFDLERIE
301: SSVNEDDKGD HHDHDHDHHH DHNHDHDHHH HDGHDHHHHS HDHTHDPGVS SVSIVCEGSL DLEKANMWLG TLLMERSEDI YRMKGLLSVH TMEERFVFQG
401: VHDIFQGSPD RLWGREEERV NKIVFIGKNL NREELEKGFK ACLI
Arabidopsis Description
PTAC17At1g80480 [Source:UniProtKB/TrEMBL;Acc:Q9M8L6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.