Factsheet for AT4G33260.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G33270.1	Thale cress	nucleus	98.66	96.5
CDY13491	Canola	cytosol	78.75	95.65
Bra037011.1-P	Field mustard	nucleus	87.92	93.79
CDX68960	Canola	nucleus	82.55	89.35
Bra034555.1-P	Field mustard	nucleus	72.71	85.75
AT5G27570.1	Thale cress	nucleus	78.75	78.22
AT5G27080.1	Thale cress	nucleus	77.18	78.05
OQU82251	Sorghum	cytosol	30.2	77.14
AT5G26900.1	Thale cress	nucleus	76.29	76.8
KRH68047	Soybean	nucleus	75.84	74.18
KRH44738	Soybean	nucleus	71.81	72.62
CDY28289	Canola	cytosol, extracellular, mitochondrion, plastid	30.43	70.47
KRG94456	Soybean	cytosol	36.91	70.21
KXG30937	Sorghum	nucleus	73.15	69.43
TraesCS5A01G272600.1	Wheat	plastid	72.48	69.38
TraesCS5B01G272800.1	Wheat	plastid	72.48	69.23
TraesCS5D01G280600.1	Wheat	plastid	72.48	69.23
Os02t0700100-01	Rice	extracellular	72.48	69.08
TraesCS6A01G268900.1	Wheat	plastid	72.93	68.78
TraesCS6B01G296200.1	Wheat	plastid	72.93	68.78
TraesCS6D01G246000.1	Wheat	plastid	72.71	68.42
Solyc08g005420.2.1	Tomato	nucleus	68.46	68.3
EES06634	Sorghum	nucleus	72.26	68.0
Zm00001d016034_P002	Maize	nucleus	71.59	67.94
PGSC0003DMT400047585	Potato	nucleus	67.79	67.63
Zm00001d000168_P001	Maize	plastid	71.14	66.67
TraesCS2B01G461400.1	Wheat	nucleus	70.02	64.01
TraesCS2D01G438800.1	Wheat	nucleus	69.35	63.66
Os04t0599800-01	Rice	nucleus	71.14	63.1
TraesCS2A01G440000.2	Wheat	nucleus	68.46	62.45
AT5G27945.1	Thale cress	cytosol, plastid, vacuole	58.84	61.45
TraesCS5A01G197800.2	Wheat	mitochondrion, plastid	65.1	61.13
TraesCS5D01G193100.1	Wheat	mitochondrion, nucleus	64.88	60.92
TraesCS5B01G185900.1	Wheat	mitochondrion, nucleus	64.88	60.92
GSMUA_AchrUn_...	Banana	cytosol	11.86	60.92
HORVU5Hr1G074370.15	Barley	endoplasmic reticulum, vacuole	62.86	59.16
TraesCS6A01G085400.1	Wheat	nucleus	50.34	58.9
Bra011430.1-P	Field mustard	cytosol	94.18	58.88
GSMUA_Achr1P27660_001	Banana	mitochondrion	21.03	58.39
Os09t0242300-00	Rice	plastid	62.19	58.16
KXG27036	Sorghum	cytosol	23.27	57.46
GSMUA_Achr1P27670_001	Banana	cytosol	8.05	57.14
CDY46124	Canola	cytosol	76.29	55.0
GSMUA_AchrUn_...	Banana	cytosol	29.31	54.81
HORVU5Hr1G041780.3	Barley	plastid	64.21	53.05
HORVU6Hr1G068080.3	Barley	plastid	62.64	52.53
GSMUA_Achr1P25940_001	Banana	cytosol	34.68	52.19
KRH07005	Soybean	nucleus	14.09	50.81
GSMUA_Achr3P21370_001	Banana	cytosol	44.97	50.63
GSMUA_AchrUn_...	Banana	nucleus	45.64	49.63
GSMUA_AchrUn_...	Banana	cytosol	40.27	49.45
GSMUA_Achr1P28050_001	Banana	cytosol	44.52	48.89
Zm00001d017725_P001	Maize	mitochondrion	33.33	47.6
GSMUA_AchrUn_...	Banana	cytosol	32.21	47.21
Zm00001d005562_P001	Maize	plastid	19.46	42.03
AT5G13840.1	Thale cress	plastid	42.06	39.09
GSMUA_AchrUn_...	Banana	cytosol	24.83	38.81
AT4G11920.1	Thale cress	nucleus	40.72	38.32
AT4G22910.1	Thale cress	nucleus, plastid	41.39	38.3
TraesCS2D01G118700.1	Wheat	cytosol	15.21	32.38
Zm00001d009154_P001	Maize	extracellular, plasma membrane, plastid	8.95	27.4
Zm00001d006622_P001	Maize	golgi	16.11	21.3
TraesCS2D01G438900.1	Wheat	mitochondrion	1.12	1.23
TraesCS2B01G461500.1	Wheat	mitochondrion	1.12	1.22

Protein Annotations

MapMan:13.3.4.1.4	Gene3D:2.130.10.10	EntrezGene:829462	ProteinID:AEE86198.1	ProteinID:AEE86199.1	EMBL:AF029263
ArrayExpress:AT4G33260	EnsemblPlantsGene:AT4G33260	RefSeq:AT4G33260	TAIR:AT4G33260	RefSeq:AT4G33260-TAIR-G	EnsemblPlants:AT4G33260.1
TAIR:AT4G33260.1	InterPro:Apc4_WD40_dom	ProteinID:CAB38784.1	ProteinID:CAB80043.1	Symbol:CDC20.2	InterPro:Cdc20/Fizzy
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010997	GO:GO:0016567	GO:GO:0019538	GO:GO:0019900	GO:GO:0030234	GO:GO:0033597
GO:GO:0051301	GO:GO:0097027	GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
RefSeq:NP_001190900.1	RefSeq:NP_195052.1	PFAM:PF00400	PFAM:PF12894	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19918	PANTHER:PTHR19918:SF30	UniProt:Q9S7I8	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00000A9EF9
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

CDC20-2Cell division cycle 20.2, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9S7I8]

Coordinates

chr4:-:16041006..16043549

Molecular Weight (calculated)

49506.2 Da

IEP (calculated)

8.178

GRAVY (calculated)

-0.482

Length

447 amino acids

Sequence
(BLAST)

001: MDAGLNRCPL QEHFLPRKNS KENLDRFIPN RSAMNFDYAH FALTEERKGK DQSATVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV ELLPSNHSAS
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.