Factsheet for Bra037011.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001174.1-P
Bra001423.1-P
Bra004677.1-P
Bra005063.1-P
Bra007362.1-P
Bra013534.1-P
Bra015512.1-P
Bra018081.1-P
Bra025616.1-P
Bra026274.1-P
Bra028905.1-P
Bra032414.1-P
Bra033769.1-P
Bra034807.1-P
Bra035062.1-P
Bra038682.1-P
Bra039034.1-P
Bra040242.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33270.1	Bra015512.1-P	AT1G06590.1	20706207
AT4G33270.1	Bra032414.1-P	AT1G06590.1	20706207
AT4G33270.1	Bra035062.1-P	AT1G78770.1	20706207
AT4G33270.1	Bra025616.1-P	AT2G04660.1	20706207
AT4G33270.1	Bra028905.1-P	AT2G04660.1	20706207
AT4G33270.1	Bra039034.1-P	AT2G20000.1	17944809
AT4G33270.1	Bra039034.1-P	AT2G20000.1	20706207
AT4G33270.1	Bra005063.1-P	AT2G39090.1	20706207
AT4G33270.1	Bra004677.1-P	AT2G42260.1	20706207
AT4G33270.1	Bra001423.1-P	AT3G11830.1	20706207
AT4G33270.1	Bra034807.1-P	AT3G11830.1	20706207
AT4G33270.1	Bra038682.1-P	AT3G11830.1	20706207
AT4G33270.1	Bra018081.1-P	AT3G48150.1	20706207
AT4G33270.1	Bra033769.1-P	AT3G48150.1	20706207
AT4G33270.1	Bra007362.1-P	AT3G57860.1	20706207
AT4G33270.1	Bra013534.1-P	AT4G21530.1	20706207
AT4G33270.1	Bra026274.1-P	AT4G28230.1	20706207
AT4G33270.1	Bra001174.1-P	AT5G26360.1	20706207
AT4G33270.1	Bra040242.1-P	AT5G26360.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G33260.1	Thale cress	nucleus	93.79	87.92
AT4G33270.1	Thale cress	nucleus	95.47	87.53
Bra034555.1-P	Field mustard	nucleus	71.12	78.63
Bra005544.1-P	Field mustard	nucleus	73.75	70.39
KRH68047	Soybean	nucleus	75.18	68.93
KRH44738	Soybean	nucleus	71.12	67.42
TraesCS5A01G272600.1	Wheat	plastid	71.12	63.81
Os02t0700100-01	Rice	extracellular	71.12	63.54
KXG30937	Sorghum	nucleus	71.36	63.48
TraesCS5D01G280600.1	Wheat	plastid	70.88	63.46
TraesCS5B01G272800.1	Wheat	plastid	70.88	63.46
Solyc08g005420.2.1	Tomato	nucleus	67.78	63.39
TraesCS6B01G296200.1	Wheat	plastid	71.12	62.87
TraesCS6A01G268900.1	Wheat	plastid	71.12	62.87
TraesCS6D01G246000.1	Wheat	plastid	70.88	62.53
Bra008327.1-P	Field mustard	cytosol, mitochondrion	63.72	62.38
EES06634	Sorghum	nucleus	70.64	62.32
OQU82251	Sorghum	cytosol	26.01	62.29
PGSC0003DMT400047585	Potato	nucleus	66.59	62.28
Zm00001d016034_P002	Maize	nucleus	69.93	62.21
KRG94456	Soybean	cytosol	34.84	62.13
Zm00001d000168_P001	Maize	plastid	69.69	61.22
TraesCS6A01G085400.1	Wheat	nucleus	54.65	59.95
KXG27036	Sorghum	cytosol	25.54	59.12
TraesCS2B01G461400.1	Wheat	nucleus	68.5	58.69
TraesCS2D01G438800.1	Wheat	nucleus	68.02	58.52
Os04t0599800-01	Rice	nucleus	69.69	57.94
TraesCS2A01G440000.2	Wheat	nucleus	66.83	57.14
Bra011430.1-P	Field mustard	cytosol	97.14	56.92
TraesCS5A01G197800.2	Wheat	mitochondrion, plastid	64.44	56.72
TraesCS5D01G193100.1	Wheat	mitochondrion, nucleus	64.2	56.51
TraesCS5B01G185900.1	Wheat	mitochondrion, nucleus	64.2	56.51
CDY46124	Canola	cytosol	83.05	56.13
GSMUA_Achr1P27670_001	Banana	cytosol	8.35	55.56
Os09t0242300-00	Rice	plastid	61.1	53.56
HORVU5Hr1G074370.15	Barley	endoplasmic reticulum, vacuole	60.62	53.47
KRH07005	Soybean	nucleus	15.51	52.42
HORVU5Hr1G041780.3	Barley	plastid	63.25	48.98
HORVU6Hr1G068080.3	Barley	plastid	59.67	46.9
Zm00001d017725_P001	Maize	mitochondrion	34.84	46.65
GSMUA_AchrUn_...	Banana	cytosol	26.49	46.44
GSMUA_Achr3P21370_001	Banana	cytosol	42.72	45.09
GSMUA_Achr1P25940_001	Banana	cytosol	31.5	44.44
GSMUA_AchrUn_...	Banana	nucleus	43.44	44.28
GSMUA_Achr1P27660_001	Banana	mitochondrion	16.95	44.1
GSMUA_Achr1P28050_001	Banana	cytosol	42.24	43.49
Zm00001d005562_P001	Maize	plastid	21.24	43.0
GSMUA_AchrUn_...	Banana	cytosol	37.23	42.86
GSMUA_AchrUn_...	Banana	cytosol	8.35	40.23
GSMUA_AchrUn_...	Banana	cytosol	28.88	39.67
GSMUA_AchrUn_...	Banana	cytosol	25.54	37.41
Bra006219.1-P	Field mustard	plastid	40.33	34.77
Bra029426.1-P	Field mustard	nucleus	38.9	34.32
Bra000756.1-P	Field mustard	nucleus	38.42	34.26
Bra019347.1-P	Field mustard	nucleus, plastid	38.42	34.26
Bra013655.1-P	Field mustard	nucleus, plastid	38.19	33.97
TraesCS2D01G118700.1	Wheat	cytosol	16.23	32.38
Zm00001d009154_P001	Maize	extracellular, plasma membrane, plastid	10.02	28.77
Zm00001d006622_P001	Maize	golgi	16.23	20.12
TraesCS2D01G438900.1	Wheat	mitochondrion	0.72	0.74
TraesCS2B01G461500.1	Wheat	mitochondrion	0.72	0.73

Protein Annotations

MapMan:13.3.4.1.4	Gene3D:2.130.10.10	InterPro:Apc4_WD40_dom	EnsemblPlantsGene:Bra037011	EnsemblPlants:Bra037011.1	EnsemblPlants:Bra037011.1-P
InterPro:Cdc20/Fizzy	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234	GO:GO:0097027
GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M4F7F1	PFAM:PF00400
PFAM:PF12894	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF30
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI00025410E0	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT4G33270 (E=4e-199) CDC20.1 | CDC20.1; signal transducer

Coordinates

chrA03:-:28972522..28974290

Molecular Weight (calculated)

46180.1 Da

IEP (calculated)

7.736

GRAVY (calculated)

-0.517

Length

419 amino acids

Sequence
(BLAST)

001: MDAGMNTSTH LKAQARCPLQ EHFLPRKNSK ENLDRFIPNR SAMDFDYAHY ALTEGNKGKD QVSSPSREAY RKQLAETMNL NHTRILAFRN KPLAPVELLP
101: TDHSASLHQQ PKSVKPRRYI PQTSERTLDA PDIVDDFYLN LLDWGSANVL AIALGHTVYL WDASTGSTSE LVTIDEEKGP VTSINWAPDG RHVAVGLNNS
201: EVQLWDSGSN RQLRTLKGCH QSRVGSLAWN NHILTTGGMD GQIVNNDVRI RSHIVETYRG HTQEVCGLKW SGSGQQLASG GNDNVVHIWD RSVASSNSTT
301: QWLHRLEEHT SAVKALAWCP FQANLLATGG GGGDRTIKFW NTHTGACLNS VDTGSQMAEL TGHTSRVLYM AQSPDGCTVA SAAGDETLRF WNVFGVPETA
401: KKAAPKAAHE PFSHVNRIR

Best Arabidopsis Sequence Match ( AT4G33270.1 )
(BLAST)

001: MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR

Arabidopsis Description

CDC20-1Cell division cycle 20.1, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9SZA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.