Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g005420.2.1 | Tomato | nucleus | 95.09 | 95.09 |
| PGSC0003DMT400001467 | Potato | nucleus | 70.98 | 70.2 |
| PGSC0003DMT400069533 | Potato | nucleus, plastid | 70.98 | 69.89 |
| CDY13491 | Canola | cytosol | 56.7 | 69.02 |
| AT4G33260.1 | Thale cress | nucleus | 67.63 | 67.79 |
| CDY59111 | Canola | nucleus | 32.14 | 66.67 |
| Bra037011.1-P | Field mustard | nucleus | 62.28 | 66.59 |
| AT4G33270.1 | Thale cress | nucleus | 67.86 | 66.52 |
| KRH44738 | Soybean | nucleus | 64.73 | 65.61 |
| CDY26774 | Canola | mitochondrion | 16.07 | 65.45 |
| KRH68047 | Soybean | nucleus | 66.74 | 65.43 |
| OQU82251 | Sorghum | cytosol | 25.45 | 65.14 |
| CDX68960 | Canola | nucleus | 58.71 | 63.68 |
| TraesCS5B01G272800.1 | Wheat | plastid | 66.29 | 63.46 |
| TraesCS5D01G280600.1 | Wheat | plastid | 66.07 | 63.25 |
| TraesCS5A01G272600.1 | Wheat | plastid | 65.62 | 62.95 |
| Os02t0700100-01 | Rice | extracellular | 65.85 | 62.9 |
| TraesCS6A01G268900.1 | Wheat | plastid | 66.52 | 62.87 |
| TraesCS6B01G296200.1 | Wheat | plastid | 66.07 | 62.45 |
| AT5G27570.1 | Thale cress | nucleus | 62.72 | 62.44 |
| AT5G27080.1 | Thale cress | nucleus | 61.61 | 62.44 |
| KXG30937 | Sorghum | nucleus | 65.62 | 62.42 |
| TraesCS6D01G246000.1 | Wheat | plastid | 66.07 | 62.32 |
| KRG94456 | Soybean | cytosol | 32.59 | 62.13 |
| Bra034555.1-P | Field mustard | nucleus | 52.46 | 62.01 |
| Zm00001d016034_P002 | Maize | nucleus | 64.96 | 61.78 |
| Bra005544.1-P | Field mustard | nucleus | 60.27 | 61.5 |
| AT5G26900.1 | Thale cress | nucleus | 60.94 | 61.49 |
| EES06634 | Sorghum | nucleus | 64.96 | 61.26 |
| CDY59109 | Canola | nucleus | 57.14 | 61.1 |
| CDY59110 | Canola | nucleus | 57.14 | 61.1 |
| Zm00001d000168_P001 | Maize | plastid | 64.96 | 61.01 |
| CDY52543 | Canola | nucleus | 58.26 | 60.98 |
| TraesCS2B01G461400.1 | Wheat | nucleus | 64.73 | 59.3 |
| TraesCS2D01G438800.1 | Wheat | nucleus | 64.29 | 59.14 |
| Bra008327.1-P | Field mustard | cytosol, mitochondrion | 56.25 | 58.88 |
| CDY28289 | Canola | cytosol, extracellular, mitochondrion, plastid | 25.22 | 58.55 |
| Os04t0599800-01 | Rice | nucleus | 65.18 | 57.94 |
| TraesCS2A01G440000.2 | Wheat | nucleus | 63.17 | 57.76 |
| TraesCS5A01G197800.2 | Wheat | mitochondrion, plastid | 60.49 | 56.93 |
| TraesCS5B01G185900.1 | Wheat | mitochondrion, nucleus | 60.04 | 56.51 |
| TraesCS5D01G193100.1 | Wheat | mitochondrion, nucleus | 60.04 | 56.51 |
| Os09t0242300-00 | Rice | plastid | 59.15 | 55.44 |
| HORVU5Hr1G074370.15 | Barley | endoplasmic reticulum, vacuole | 58.48 | 55.16 |
| KXG27036 | Sorghum | cytosol | 22.1 | 54.7 |
| TraesCS6A01G085400.1 | Wheat | nucleus | 46.43 | 54.45 |
| GSMUA_Achr1P27660_001 | Banana | mitochondrion | 19.2 | 53.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 10.27 | 52.87 |
| CDY71694 | Canola | nucleus | 20.31 | 52.6 |
| KRH07005 | Soybean | nucleus | 14.51 | 52.42 |
| AT5G27945.1 | Thale cress | cytosol, plastid, vacuole | 49.11 | 51.4 |
| HORVU5Hr1G041780.3 | Barley | plastid | 60.27 | 49.91 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.34 | 49.37 |
| GSMUA_Achr1P27670_001 | Banana | cytosol | 6.92 | 49.21 |
| GSMUA_Achr3P21370_001 | Banana | cytosol | 42.86 | 48.36 |
| CDY44519 | Canola | cytosol, nucleus | 55.36 | 47.78 |
| GSMUA_Achr1P25940_001 | Banana | cytosol | 31.47 | 47.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.86 | 46.72 |
| HORVU6Hr1G068080.3 | Barley | plastid | 54.91 | 46.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.5 | 46.15 |
| GSMUA_Achr1P28050_001 | Banana | cytosol | 41.29 | 45.45 |
| CDY28290 | Canola | cytosol, mitochondrion, nucleus | 14.73 | 45.21 |
| Zm00001d017725_P001 | Maize | mitochondrion | 29.91 | 42.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.79 | 42.3 |
| Bra011430.1-P | Field mustard | cytosol | 67.19 | 42.1 |
| PGSC0003DMT400013474 | Potato | cytosol | 42.41 | 39.92 |
| Zm00001d005562_P001 | Maize | plastid | 18.3 | 39.61 |
| CDY46124 | Canola | cytosol | 53.35 | 38.55 |
| PGSC0003DMT400058525 | Potato | nucleus, plastid | 39.96 | 37.45 |
| PGSC0003DMT400027994 | Potato | nucleus, plastid | 39.51 | 36.42 |
| PGSC0003DMT400076326 | Potato | nucleus, plastid | 39.96 | 35.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.54 | 35.31 |
| TraesCS2D01G118700.1 | Wheat | cytosol | 14.51 | 30.95 |
| Zm00001d009154_P001 | Maize | extracellular, plasma membrane, plastid | 8.71 | 26.71 |
| Zm00001d006622_P001 | Maize | golgi | 14.96 | 19.82 |
| TraesCS2D01G438900.1 | Wheat | mitochondrion | 1.12 | 1.23 |
| TraesCS2B01G461500.1 | Wheat | mitochondrion | 1.12 | 1.22 |
Protein Annotations
| EntrezGene:102580347 | MapMan:13.3.4.1.4 | Gene3D:2.130.10.10 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010997 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M1BL19 | PFAM:PF00400 | PFAM:PF12894 | EnsemblPlantsGene:PGSC0003DMG400018492 |
| PGSC:PGSC0003DMG400018492 | EnsemblPlants:PGSC0003DMT400047585 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 |
| PANTHER:PTHR19918:SF30 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI00029639F3 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | RefSeq:XP_006361252.1 | : | : |
Description
Cell division control 20 [Source:PGSC_GENE;Acc:PGSC0003DMG400018492]
Coordinates
chr8:-:3841902..3844819
Molecular Weight (calculated)
50265.5 Da
IEP (calculated)
9.092
GRAVY (calculated)
-0.471
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAGSRYNKF RPPLVNQMSH KKRTRENLDR FIPNRSAMDF DYAHYMLSGG KVKKEHYGVN SPSKEAYSKQ LAEIFNMNRT RILAFKNKPP HSAERVSESP
101: SSIQQSKTIK KRRYIPQSSE RTLDAPDILD DFYLNLLDWG SNNILAIALG NSVYLWDASD ESATELLTVD DDFGPVTAVS WSPDGRHLAV GLNNSHVQLW
201: NTLQGSCRLL RTLRGHSLRV GSLDWNENIL TTGGMDSMII NNDVRVRSHI VGTYRGHNQE ICGLKWSASG QQLASGGNDN LVHIWSISMG SANSTHQWVH
301: RMTDHTAAVK ALSWCPFQSN MVASGGGVGD QCIKFWNTNT GACLNSVNTG SQVCSLLWNR HDRELLSSHG FTDNQLTVWK YPSMMKISEL LGHTSRVLYM
401: AQSPDGYTVA TAAADETLRL WNVFGSPKET KPVLKRKLEP FFDLAQIR
101: SSIQQSKTIK KRRYIPQSSE RTLDAPDILD DFYLNLLDWG SNNILAIALG NSVYLWDASD ESATELLTVD DDFGPVTAVS WSPDGRHLAV GLNNSHVQLW
201: NTLQGSCRLL RTLRGHSLRV GSLDWNENIL TTGGMDSMII NNDVRVRSHI VGTYRGHNQE ICGLKWSASG QQLASGGNDN LVHIWSISMG SANSTHQWVH
301: RMTDHTAAVK ALSWCPFQSN MVASGGGVGD QCIKFWNTNT GACLNSVNTG SQVCSLLWNR HDRELLSSHG FTDNQLTVWK YPSMMKISEL LGHTSRVLYM
401: AQSPDGYTVA TAAADETLRL WNVFGSPKET KPVLKRKLEP FFDLAQIR
001: MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR
Arabidopsis Description
CDC20-1Cell division cycle 20.1, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9SZA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.