Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g043150.2.1 | Tomato | nucleus, plastid | 97.61 | 98.2 |
| VIT_13s0019g01840.t01 | Wine grape | plastid | 82.27 | 87.69 |
| AT5G13840.1 | Thale cress | plastid | 78.88 | 82.33 |
| CDX70523 | Canola | plastid | 76.29 | 81.84 |
| CDX78541 | Canola | plastid | 76.1 | 81.62 |
| Bra006219.1-P | Field mustard | plastid | 77.89 | 80.45 |
| KRG97899 | Soybean | plastid | 78.09 | 80.16 |
| KRH30985 | Soybean | plastid | 78.88 | 79.2 |
| GSMUA_Achr5P07090_001 | Banana | plastid | 70.92 | 78.41 |
| Os01t0972900-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 68.13 | 71.55 |
| EES02145 | Sorghum | plastid | 68.13 | 70.95 |
| Zm00001d041957_P004 | Maize | plastid | 67.73 | 70.1 |
| TraesCS3D01G533000.1 | Wheat | plastid | 66.33 | 68.94 |
| TraesCS3B01G595600.1 | Wheat | plastid | 66.53 | 68.87 |
| TraesCS3A01G527600.1 | Wheat | plastid | 66.14 | 68.17 |
| PGSC0003DMT400058525 | Potato | nucleus, plastid | 56.37 | 59.2 |
| HORVU3Hr1G115170.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 66.33 | 56.73 |
| PGSC0003DMT400027994 | Potato | nucleus, plastid | 54.58 | 56.38 |
| PGSC0003DMT400069533 | Potato | nucleus, plastid | 37.85 | 41.76 |
| PGSC0003DMT400001467 | Potato | nucleus | 37.65 | 41.72 |
| PGSC0003DMT400047585 | Potato | nucleus | 35.66 | 39.96 |
| PGSC0003DMT400013474 | Potato | cytosol | 30.88 | 32.56 |
| Os01t0973000-01 | Rice | cytosol | 0.4 | 0.71 |
Protein Annotations
| EntrezGene:102600890 | MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | UniProt:M1CWJ3 | PFAM:PF00400 | EnsemblPlantsGene:PGSC0003DMG400029675 | PGSC:PGSC0003DMG400029675 | EnsemblPlants:PGSC0003DMT400076326 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI000296155B | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | RefSeq:XP_006343746.1 | SEG:seg | : | : | : |
Description
Cell cycle switch 52B [Source:PGSC_GENE;Acc:PGSC0003DMG400029675]
Coordinates
chr6:+:23819788..23823029
Molecular Weight (calculated)
54674.4 Da
IEP (calculated)
9.947
GRAVY (calculated)
-0.448
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MESITQRRKS GINLPSTMSE TSLRLDAFSS PPRSKRTTNL ASSPMSNRSP RTISNLSSSP SSKSASCSDR FIPCRSSSRL HTFGLVEKAS PVKEGGGNND
101: AYSRLLKSEL FGADFGCFSS PAGSKGCANS PMSSPSKNML RFKTENSGPN SPYSPSVLGH TDTSLSNEVS TPPKPPRKVP KTPHKVLDAP SLQDDFYLNL
201: VDWSSQNVLA VGLGTCVYLW TASNSRVTKL CDLGPTDSVC SVQWTREGSY ISIGTSLGQV QVWDGTQCKK VRTFGGHQTR TGVLAWSSRI LSSGSRDRNI
301: LQHDVRVPSD FVSKFIGHKS EVCGLKWSHD DRELASGGND NQLLVWNQRS QQPVLKLTEH TAAVKAITWS PHQCGLLASG GGTADRCIRF WNTTNGNQLN
401: HIDTGSQVCN LAWSRNVNEI VSTHGYSQNQ IMVWKYPSMS KVATLTGHSL RVLYLAMSPD GQTIVTGAGD ETLRFWNVFP SVKTPAAVKD TGVWSLGRTH
501: IR
101: AYSRLLKSEL FGADFGCFSS PAGSKGCANS PMSSPSKNML RFKTENSGPN SPYSPSVLGH TDTSLSNEVS TPPKPPRKVP KTPHKVLDAP SLQDDFYLNL
201: VDWSSQNVLA VGLGTCVYLW TASNSRVTKL CDLGPTDSVC SVQWTREGSY ISIGTSLGQV QVWDGTQCKK VRTFGGHQTR TGVLAWSSRI LSSGSRDRNI
301: LQHDVRVPSD FVSKFIGHKS EVCGLKWSHD DRELASGGND NQLLVWNQRS QQPVLKLTEH TAAVKAITWS PHQCGLLASG GGTADRCIRF WNTTNGNQLN
401: HIDTGSQVCN LAWSRNVNEI VSTHGYSQNQ IMVWKYPSMS KVATLTGHSL RVLYLAMSPD GQTIVTGAGD ETLRFWNVFP SVKTPAAVKD TGVWSLGRTH
501: IR
001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
Arabidopsis Description
FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.