Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G533000.1 | Wheat | plastid | 79.56 | 96.69 |
| TraesCS3B01G595600.1 | Wheat | plastid | 79.73 | 96.49 |
| TraesCS3A01G527600.1 | Wheat | plastid | 79.05 | 95.28 |
| Os01t0972900-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 67.12 | 82.43 |
| EES02145 | Sorghum | plastid | 66.61 | 81.12 |
| Zm00001d041957_P004 | Maize | plastid | 66.61 | 80.62 |
| GSMUA_Achr5P07090_001 | Banana | plastid | 58.94 | 76.21 |
| CDX70523 | Canola | plastid | 57.41 | 72.01 |
| CDX78541 | Canola | plastid | 57.24 | 71.79 |
| VIT_13s0019g01840.t01 | Wine grape | plastid | 56.9 | 70.91 |
| AT5G13840.1 | Thale cress | plastid | 57.75 | 70.48 |
| Bra006219.1-P | Field mustard | plastid | 57.41 | 69.34 |
| KRG97899 | Soybean | plastid | 57.24 | 68.71 |
| KRH30985 | Soybean | plastid | 57.75 | 67.8 |
| Solyc06g043150.2.1 | Tomato | nucleus, plastid | 56.73 | 66.73 |
| PGSC0003DMT400076326 | Potato | nucleus, plastid | 56.73 | 66.33 |
| HORVU4Hr1G084710.1 | Barley | cytosol, mitochondrion | 51.45 | 53.64 |
| CDY04804 | Canola | mitochondrion, plastid | 11.58 | 42.5 |
| HORVU5Hr1G074370.15 | Barley | endoplasmic reticulum, vacuole | 28.11 | 34.74 |
| HORVU5Hr1G041780.3 | Barley | plastid | 31.52 | 34.2 |
| HORVU6Hr1G068080.3 | Barley | plastid | 29.3 | 32.27 |
| Os01t0973000-01 | Rice | cytosol | 0.68 | 1.42 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | UniProt:A0A287MSP6 | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | EnsemblPlantsGene:HORVU3Hr1G115170 | EnsemblPlants:HORVU3Hr1G115170.1 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF08662 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | SMART:SM00320 | SUPFAM:SSF50978 | InterPro:TIF_beta_prop-like |
| UniParc:UPI000B4797E3 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:692797735..692801414
Molecular Weight (calculated)
63325.7 Da
IEP (calculated)
10.888
GRAVY (calculated)
-0.533
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: EGWSVGRAPR VGVSGNGYSA PPAQTRLAAR NRKRPAQVTV ADCLVPSPDP HPHPHRHRSR RRHPPTHPPR RPRRRSPPTQ SRRLGRPGRA AEATTRIGPV
101: AMAAAASGAS AGAGAKPGRL NVPAGMAGSL RLDPSSPASS ASSAAAAARL LEIPKTPSPS KVTYSDRFIP CRSSSRLHNF SLADRPSPGS GSRDDSSAYS
201: RLLRAELFGG DSSPGGDKQE SPGSNNLFRF KTDPRSSAPS SPFAEKLDCT GVGSPTPKKA PRKVPKTPHK VLDAPSLQDD FYLNLVDWSS QNMLAVGLGT
301: CVYLWSASSS KVTKLCDLGP RDSVCAVHWT REGSYLAVGT SLGDVQIWDS SRCKRIRNMG GHQTRAGVLA WNSTILSSGS RDKNILQHDI RVPTDYISKF
401: AGHRSEVCGL KWSHDDRELA SGGNDNQLLV WNQRSQQPVL RLTQHTAAVK AIAWSPHQHS LVASGGGTAD RCIKFWNTAN GNMLNSIDTG SQVCNLAWCK
501: NVNELVSTHG YSQNQIMVWK YPSMSKVATL TGHTLRVLYL ATSPDGQTIV TGAGDETLRF WNIFPSMKAQ APARDAGLFS FSRSHIR
101: AMAAAASGAS AGAGAKPGRL NVPAGMAGSL RLDPSSPASS ASSAAAAARL LEIPKTPSPS KVTYSDRFIP CRSSSRLHNF SLADRPSPGS GSRDDSSAYS
201: RLLRAELFGG DSSPGGDKQE SPGSNNLFRF KTDPRSSAPS SPFAEKLDCT GVGSPTPKKA PRKVPKTPHK VLDAPSLQDD FYLNLVDWSS QNMLAVGLGT
301: CVYLWSASSS KVTKLCDLGP RDSVCAVHWT REGSYLAVGT SLGDVQIWDS SRCKRIRNMG GHQTRAGVLA WNSTILSSGS RDKNILQHDI RVPTDYISKF
401: AGHRSEVCGL KWSHDDRELA SGGNDNQLLV WNQRSQQPVL RLTQHTAAVK AIAWSPHQHS LVASGGGTAD RCIKFWNTAN GNMLNSIDTG SQVCNLAWCK
501: NVNELVSTHG YSQNQIMVWK YPSMSKVATL TGHTLRVLYL ATSPDGQTIV TGAGDETLRF WNIFPSMKAQ APARDAGLFS FSRSHIR
001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
Arabidopsis Description
FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.