Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G533000.1 | Wheat | plastid | 99.38 | 99.79 |
| TraesCS3A01G527600.1 | Wheat | plastid | 98.76 | 98.36 |
| Os01t0972900-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 80.82 | 82.01 |
| EES02145 | Sorghum | plastid | 80.0 | 80.5 |
| Zm00001d041957_P004 | Maize | plastid | 80.21 | 80.21 |
| HORVU3Hr1G115170.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 96.49 | 79.73 |
| GSMUA_Achr5P07090_001 | Banana | plastid | 71.75 | 76.65 |
| CDX70523 | Canola | plastid | 70.1 | 72.65 |
| CDX78541 | Canola | plastid | 69.9 | 72.44 |
| AT5G13840.1 | Thale cress | plastid | 70.52 | 71.1 |
| VIT_13s0019g01840.t01 | Wine grape | plastid | 68.87 | 70.91 |
| Bra006219.1-P | Field mustard | plastid | 70.1 | 69.96 |
| KRG97899 | Soybean | plastid | 69.07 | 68.51 |
| KRH30985 | Soybean | plastid | 70.1 | 68.0 |
| Solyc06g043150.2.1 | Tomato | nucleus, plastid | 68.87 | 66.93 |
| PGSC0003DMT400076326 | Potato | nucleus, plastid | 68.87 | 66.53 |
| TraesCS4B01G346200.2 | Wheat | nucleus, plastid | 59.79 | 56.53 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 47.01 | 53.9 |
| TraesCS7B01G353500.1 | Wheat | plastid | 44.95 | 53.83 |
| CDY04804 | Canola | mitochondrion, plastid | 13.81 | 41.88 |
| TraesCS5B01G272800.1 | Wheat | plastid | 38.97 | 40.38 |
| TraesCS6B01G296200.1 | Wheat | plastid | 38.97 | 39.87 |
| TraesCS5B01G185900.1 | Wheat | mitochondrion, nucleus | 37.53 | 38.24 |
| TraesCS2B01G461400.1 | Wheat | nucleus | 38.35 | 38.04 |
| Os01t0973000-01 | Rice | cytosol | 0.82 | 1.42 |
| TraesCS2B01G461500.1 | Wheat | mitochondrion | 0.62 | 0.73 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 |
| SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS3B01G595600 | EnsemblPlants:TraesCS3B01G595600.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | TIGR:cd00200 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:+:818749122..818752247
Molecular Weight (calculated)
52039.2 Da
IEP (calculated)
9.846
GRAVY (calculated)
-0.386
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAASGASA GAGAGAKPGR LNVPAGMAGS LRLDASSPAS SSSSVARLLE IPKTPSPSKV TYSDRFIPCR TSSRLHNFAL ADRPSPGSGS RDDGSAYSRL
101: LRAELFGGDA SPGGDRQDSP GSNNLFRFKT DRSSAPSSPF AEKLDCAGGA GSPTPKKAPR KVPKTPHKVL DAPSLQDDFY LNLVDWSSQN MLAVGLGTCV
201: YLWSASSSKV TKLCDLGPRD SVCAVHWTRE GSYLAVGTSL GDVQIWDSSR CKRIRNMGGH QTRAGVLAWN STILSSGSRD KNILQHDIRV PTDYISKFSG
301: HRSEVCGLKW SHDDRELASG GNDNQLLVWN QRSQQPVLRL TEHTAAVKAI TWSPHQHSLV ASGGGTADRC IKFWNTANGN MLNSIDTGSQ VCNLAWCKNV
401: NELVSTHGYS QNQIMVWKYP SMSKVATLTG HTLRVLYLAT SPDGQTIVTG AGDETLRFWN IFPSMKAQAP ARDAGLFSFS RSHIR
101: LRAELFGGDA SPGGDRQDSP GSNNLFRFKT DRSSAPSSPF AEKLDCAGGA GSPTPKKAPR KVPKTPHKVL DAPSLQDDFY LNLVDWSSQN MLAVGLGTCV
201: YLWSASSSKV TKLCDLGPRD SVCAVHWTRE GSYLAVGTSL GDVQIWDSSR CKRIRNMGGH QTRAGVLAWN STILSSGSRD KNILQHDIRV PTDYISKFSG
301: HRSEVCGLKW SHDDRELASG GNDNQLLVWN QRSQQPVLRL TEHTAAVKAI TWSPHQHSLV ASGGGTADRC IKFWNTANGN MLNSIDTGSQ VCNLAWCKNV
401: NELVSTHGYS QNQIMVWKYP SMSKVATLTG HTLRVLYLAT SPDGQTIVTG AGDETLRFWN IFPSMKAQAP ARDAGLFSFS RSHIR
001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
Arabidopsis Description
FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.