Factsheet for TraesCS7D01G513300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G173100.1	Wheat	cytosol	98.9	95.39
TraesCS7B01G441900.1	Wheat	cytosol	90.44	90.44
TraesCS7B01G441800.1	Wheat	cytosol	90.44	90.44
TraesCS7A01G524400.1	Wheat	cytosol	88.97	88.97
TraesCSU01G173200.1	Wheat	cytosol	83.46	87.31
HORVU7Hr1G116460.1	Barley	cytosol	84.56	82.44
HORVU7Hr1G116400.2	Barley	cytosol	84.56	82.44
Os06t0638900-01	Rice	cytosol, plasma membrane	27.21	71.15
Zm00001d046625_P001	Maize	cytosol	64.34	59.12
OQU76760	Sorghum	cytosol	60.29	58.99
CDX72452	Canola	cytosol	45.59	49.21
KRH77964	Soybean	cytosol	45.96	48.08
CDY49277	Canola	cytosol	46.32	47.91
AT4G34150.1	Thale cress	cytosol	43.38	47.77
PGSC0003DMT400066559	Potato	cytosol	40.81	47.23
VIT_03s0180g00030.t01	Wine grape	cytosol	42.65	46.96
Bra017628.1-P	Field mustard	cytosol	45.22	46.95
Bra011500.1-P	Field mustard	cytosol	44.12	46.51
KRH27566	Soybean	cytosol	44.12	46.51
Bra034611.1-P	Field mustard	cytosol	41.18	46.47
CDX76264	Canola	cytosol	40.81	46.06
CDX75404	Canola	cytosol, extracellular, nucleus	43.38	45.74
Solyc01g107740.2.1	Tomato	cytosol	39.71	45.38
Solyc10g050060.1.1	Tomato	cytosol	40.07	43.6
PGSC0003DMT400015906	Potato	cytosol	40.07	43.6
CDY57743	Canola	cytosol	38.24	43.51
GSMUA_Achr3P19730_001	Banana	mitochondrion	42.65	41.88
VIT_18s0001g09970.t01	Wine grape	cytosol	45.22	41.28
PGSC0003DMT400077661	Potato	cytosol	27.94	37.25
CDY31792	Canola	cytosol	8.82	36.92
CDY31791	Canola	extracellular, plasma membrane	6.25	20.99

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009409
GO:GO:0009506	GO:GO:0009628	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF345	SMART:SM00239	SUPFAM:SSF49562	EnsemblPlantsGene:TraesCS7D01G513300	EnsemblPlants:TraesCS7D01G513300.1
TIGR:cd00030	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:614511918..614515247

Molecular Weight (calculated)

29870.0 Da

IEP (calculated)

8.837

GRAVY (calculated)

-0.825

Length

272 amino acids

Sequence
(BLAST)

001: MSIQGLLLEV RVTGCRKLRD TEFFSRQDPY VIVEYANTKL RTRTCTDGGR NPSFDEKFHI PLIEGLRELS INVWNSNTIN TDDFIGSCRV PLNKVLTSGY
101: DDASWPLQTR HMKSAGEVKL IMHFDVSAMK NKMAGKTSGQ YAPSPYGASS ASYPAPSAYA AAPPPHQAYG APSHAPYPAP SAYSTPPPQQ PYPTPPPQQP
201: YPQQGGPPTS HPPQPYGQPY PPQPYGQPYP PQPYGQQPYP PQPYGQPYPP PSAAQSPYPP APYPGAYPPR PY

Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)

001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY

Arabidopsis Description

AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.