Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G34150.1 | Thale cress | cytosol | 34.57 | 11.34 |
| CDX72452 | Canola | cytosol | 34.57 | 11.11 |
| VIT_03s0180g00030.t01 | Wine grape | cytosol | 33.33 | 10.93 |
| CDX75404 | Canola | cytosol, extracellular, nucleus | 34.57 | 10.85 |
| CDY49277 | Canola | cytosol | 34.57 | 10.65 |
| PGSC0003DMT400066559 | Potato | cytosol | 29.63 | 10.21 |
| Solyc01g107740.2.1 | Tomato | cytosol | 29.63 | 10.08 |
| CDY57743 | Canola | cytosol | 29.63 | 10.04 |
| CDX76264 | Canola | cytosol | 29.63 | 9.96 |
| PGSC0003DMT400077661 | Potato | cytosol | 24.69 | 9.8 |
| KRH27566 | Soybean | cytosol | 30.86 | 9.69 |
| KRH77964 | Soybean | cytosol | 28.4 | 8.85 |
| Solyc10g050060.1.1 | Tomato | cytosol | 27.16 | 8.8 |
| PGSC0003DMT400015906 | Potato | cytosol | 27.16 | 8.8 |
| GSMUA_Achr4P09410_001 | Banana | cytosol | 24.69 | 8.2 |
| Os06t0638900-01 | Rice | cytosol, plasma membrane | 9.88 | 7.69 |
| GSMUA_Achr3P19730_001 | Banana | mitochondrion | 25.93 | 7.58 |
| TraesCSU01G173200.1 | Wheat | cytosol | 20.99 | 6.54 |
| TraesCS7A01G524400.1 | Wheat | cytosol | 20.99 | 6.25 |
| TraesCS7B01G441800.1 | Wheat | cytosol | 20.99 | 6.25 |
| TraesCS7B01G441900.1 | Wheat | cytosol | 20.99 | 6.25 |
| TraesCS7D01G513300.1 | Wheat | cytosol | 20.99 | 6.25 |
| OQU76760 | Sorghum | cytosol | 20.99 | 6.12 |
| Zm00001d046625_P001 | Maize | cytosol | 22.22 | 6.08 |
| TraesCSU01G173100.1 | Wheat | cytosol | 20.99 | 6.03 |
| HORVU7Hr1G116460.1 | Barley | cytosol | 19.75 | 5.73 |
| HORVU7Hr1G116400.2 | Barley | cytosol | 19.75 | 5.73 |
| CDY31792 | Canola | cytosol | 2.47 | 3.08 |
Protein Annotations
| EnsemblPlants:CDY31791 | EnsemblPlantsGene:GSBRNA2T00050465001 | GO:A0A078H1Y7 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ProteinID:CDY31791 | ProteinID:CDY31791.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDE131 | UniProt:A0A078H1Y7 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC01g27470DBnaC01g27470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1Y7]
Coordinates
chrLK032279:-:315509..315818
Molecular Weight (calculated)
9288.8 Da
IEP (calculated)
10.710
GRAVY (calculated)
0.293
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MLYILSLFGI GIESFLLCLF VVVRIQLQKV LSQGYKDCTW TLYVKTGSSI VCICISYVAP RRIRGQKRGR NRGRETAKLK M
001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY
Arabidopsis Description
AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.