Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G116400.2 Barley cytosol 100.0 100.0
TraesCS7D01G513300.1 Wheat cytosol 82.44 84.56
TraesCSU01G173100.1 Wheat cytosol 82.44 81.56
TraesCS7B01G441900.1 Wheat cytosol 77.42 79.41
TraesCS7B01G441800.1 Wheat cytosol 77.42 79.41
TraesCS7A01G524400.1 Wheat cytosol 77.06 79.04
TraesCSU01G173200.1 Wheat cytosol 70.61 75.77
Os06t0638900-01 Rice cytosol, plasma membrane 26.88 72.12
OQU76760 Sorghum cytosol 54.48 54.68
Zm00001d046625_P001 Maize cytosol 55.91 52.7
CDX72452 Canola cytosol 42.29 46.83
KRH27566 Soybean cytosol 43.01 46.51
CDY49277 Canola cytosol 43.37 46.01
KRH77964 Soybean cytosol 42.65 45.77
AT4G34150.1 Thale cress cytosol 40.5 45.75
Bra011500.1-P Field mustard cytosol 42.29 45.74
PGSC0003DMT400066559 Potato cytosol 38.35 45.53
CDX75404 Canola cytosol, extracellular, nucleus 41.94 45.35
VIT_03s0180g00030.t01 Wine grape cytosol 40.14 45.34
Bra017628.1-P Field mustard cytosol 42.29 45.04
PGSC0003DMT400015906 Potato cytosol 39.78 44.4
Bra034611.1-P Field mustard cytosol 38.35 44.4
CDX76264 Canola cytosol 37.99 43.98
Solyc01g107740.2.1 Tomato cytosol 37.28 43.7
Solyc10g050060.1.1 Tomato cytosol 39.07 43.6
CDY57743 Canola cytosol 35.84 41.84
GSMUA_Achr3P19730_001 Banana mitochondrion 39.07 39.35
PGSC0003DMT400077661 Potato cytosol 27.24 37.25
VIT_18s0001g09970.t01 Wine grape cytosol 39.78 37.25
CDY31792 Canola cytosol 8.6 36.92
CDY31791 Canola extracellular, plasma membrane 5.73 19.75
Protein Annotations
EnsemblPlants:HORVU7Hr1G116460.1EnsemblPlantsGene:HORVU7Hr1G116460Gene3D:2.60.40.150InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008
InterPro:IPR035892PANTHER:PTHR10024PANTHER:PTHR10024:SF345PFAM:PF00168PFscan:PS50004PRINTS:PR01217
SEG:segSMART:SM00239SUPFAM:SSF49562UniParc:UPI000B46EAB1UniProt:A0A287XXI6MapMan:35.2
Description
No Description!
Coordinates
chrchr7H:+:643500053..643503688
Molecular Weight (calculated)
30746.2 Da
IEP (calculated)
8.403
GRAVY (calculated)
-0.670
Length
279 amino acids
Sequence
(BLAST)
001: PPMSIQGQLL EVRVTGCRKL RDTEFFSRQD PYVIIDYANN KLRTRTCTDG GRNPSFDEKF HIPLIEGLRE LSINVWNSNT INTDDFIGSC RVPLNKVLTS
101: GFDDASWPLQ TRHMKSAGEV MLIMHFDVSA MVSERLITGL CFIKNKMAGK PTGQYAPSPY GASSASYPAP SAYAAAPPPH QAYAAPAHAP YPAPSAYSTP
201: PPQQPYPHQA CPPTSQPPQP YGQPYPPQQL YGQPYPPQQP YGQQPYPPQP YGQPYPPPSA AQSPYPPAPY PGAYPPRPY
Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)
001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY
Arabidopsis Description
AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.