Factsheet for TraesCS7B01G441900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G441800.1	Wheat	cytosol	100.0	100.0
TraesCS7A01G524400.1	Wheat	cytosol	97.79	97.79
TraesCSU01G173200.1	Wheat	cytosol	93.01	97.31
TraesCS7D01G513300.1	Wheat	cytosol	90.44	90.44
HORVU7Hr1G116460.1	Barley	cytosol	79.41	77.42
HORVU7Hr1G116400.2	Barley	cytosol	79.41	77.42
Os06t0638900-01	Rice	cytosol, plasma membrane	27.57	72.12
Zm00001d046625_P001	Maize	cytosol	65.44	60.14
OQU76760	Sorghum	cytosol	59.56	58.27
KRH77964	Soybean	cytosol	47.79	50.0
CDX72452	Canola	cytosol	45.96	49.6
KRH27566	Soybean	cytosol	46.69	49.22
VIT_03s0180g00030.t01	Wine grape	cytosol	44.12	48.58
PGSC0003DMT400066559	Potato	cytosol	41.91	48.51
Bra017628.1-P	Field mustard	cytosol	46.69	48.47
CDY49277	Canola	cytosol	46.69	48.29
AT4G34150.1	Thale cress	cytosol	43.75	48.18
Bra011500.1-P	Field mustard	cytosol	44.85	47.29
Bra034611.1-P	Field mustard	cytosol	41.54	46.89
Solyc01g107740.2.1	Tomato	cytosol	40.81	46.64
CDX75404	Canola	cytosol, extracellular, nucleus	44.12	46.51
CDX76264	Canola	cytosol	41.18	46.47
CDY57743	Canola	cytosol	40.07	45.61
PGSC0003DMT400015906	Potato	cytosol	41.91	45.6
Solyc10g050060.1.1	Tomato	cytosol	41.91	45.6
GSMUA_Achr3P19730_001	Banana	mitochondrion	44.12	43.32
VIT_18s0001g09970.t01	Wine grape	cytosol	45.96	41.95
PGSC0003DMT400077661	Potato	cytosol	29.41	39.22
CDY31792	Canola	cytosol	9.19	38.46
CDY31791	Canola	extracellular, plasma membrane	6.25	20.99

Protein Annotations

EnsemblPlants:TraesCS7B01G441900.1	EnsemblPlantsGene:TraesCS7B01G441900	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR10024	PANTHER:PTHR10024:SF345	PFAM:PF00168	PFscan:PS50004	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	TIGR:cd00030	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7B:-:706822479..706826352

Molecular Weight (calculated)

29941.0 Da

IEP (calculated)

8.837

GRAVY (calculated)

-0.866

Length

272 amino acids

Sequence
(BLAST)

001: MSIQGQLLEV RVTGCRKLRD TEFFSRQDPY VIVEYANTKL RTRTCTDGGR NPSFDEKFHI PLIEGLRELS INVWNSNTIN TDDFIGSCRV PLNKVLTSGY
101: DDSSWPLQTR HMKSAGEVKL IMHFDVSAMK NKMAGKTSGQ YAPSPYGASS ASYPAPSAYA AAPPPHQAYP APSHAPYPAP SAYSTPPPQQ PYPTPPPQQP
201: YPQQGGPPTS HPPQPYGQPY PPQPYGQPYP PQPYGQQPYP PQPYGQPYPP PSAAQSPYPP APYPGAYPPR PY

Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)

001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY

Arabidopsis Description

AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.