Factsheet for Zm00001d046625_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76760	Sorghum	cytosol	82.77	88.13
Os06t0638900-01	Rice	cytosol, plasma membrane	28.04	79.81
TraesCS7A01G524400.1	Wheat	cytosol	60.14	65.44
TraesCS7B01G441800.1	Wheat	cytosol	60.14	65.44
TraesCS7B01G441900.1	Wheat	cytosol	60.14	65.44
TraesCS7D01G513300.1	Wheat	cytosol	59.12	64.34
TraesCSU01G173200.1	Wheat	cytosol	55.41	63.08
TraesCSU01G173100.1	Wheat	cytosol	59.12	62.06
HORVU7Hr1G116400.2	Barley	cytosol	52.7	55.91
HORVU7Hr1G116460.1	Barley	cytosol	52.7	55.91
PGSC0003DMT400066559	Potato	cytosol	41.89	52.77
Solyc01g107740.2.1	Tomato	cytosol	41.22	51.26
VIT_03s0180g00030.t01	Wine grape	cytosol	41.89	50.2
KRH77964	Soybean	cytosol	43.58	49.62
CDX72452	Canola	cytosol	42.23	49.6
Bra034611.1-P	Field mustard	cytosol	39.86	48.96
CDX76264	Canola	cytosol	39.53	48.55
CDY49277	Canola	cytosol	42.91	48.29
AT4G34150.1	Thale cress	cytosol	39.86	47.77
Bra017628.1-P	Field mustard	cytosol	41.89	47.33
KRH27566	Soybean	cytosol	41.22	47.29
PGSC0003DMT400015906	Potato	cytosol	39.86	47.2
Solyc10g050060.1.1	Tomato	cytosol	39.86	47.2
Bra011500.1-P	Field mustard	cytosol	40.54	46.51
CDY57743	Canola	cytosol	37.5	46.44
CDX75404	Canola	cytosol, extracellular, nucleus	40.2	46.12
GSMUA_Achr3P19730_001	Banana	mitochondrion	42.23	45.13
PGSC0003DMT400077661	Potato	cytosol	28.72	41.67
VIT_18s0001g09970.t01	Wine grape	cytosol	41.55	41.28
CDY31792	Canola	cytosol	7.77	35.38
CDY31791	Canola	extracellular, plasma membrane	6.08	22.22

Protein Annotations

EntrezGene:100280708	Gene3D:2.60.40.150	MapMan:35.2	ProteinID:AQL04736.1	UniProt:B6SKP7	InterPro:C2_dom
InterPro:C2_domain_sf	EMBL:EU953312	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009409	GO:GO:0009506	GO:GO:0009628
InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF345
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000182B60D	EnsemblPlantsGene:Zm00001d046625	EnsemblPlants:Zm00001d046625_P001	EnsemblPlants:Zm00001d046625_T001
SEG:seg	:	:	:	:	:

Description

Calcium-binding protein

Coordinates

chr9:+:99488946..99492927

Molecular Weight (calculated)

32361.0 Da

IEP (calculated)

7.693

GRAVY (calculated)

-0.629

Length

296 amino acids

Sequence
(BLAST)

001: MSIHGLILEV RVTGCRKLRD TEFFTRQDPY VVVEYATTKL RTRTCTDGGR NPTFDEKFHI PLIEGLRELN VIVWNSNTLT HDDFIGSGRV YLHKVLTNGY
101: DDSSWPLQTR HMRSAGEVKL IMHVDVSAMK NKMGRSVAAS SAHPVPALSM PAPSPTPAPA PSPASAATPA PAPALASAIP YTGVSPSYPP VSAYPGATAY
201: PAYPTSSHAP YTTAEYPPPP QQPYQPPPAG YPPSYPPQPY EQSYPPQPYE GSYPPQPYER SYPPQPYGQQ PYPPPPAAES PYPPAPYPGT YPPRPY

Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)

001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY

Arabidopsis Description

AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.