CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77964	Soybean	cytosol	78.29	77.69
VIT_03s0180g00030.t01	Wine grape	cytosol	61.24	63.97
Os06t0638900-01	Rice	cytosol, plasma membrane	25.19	62.5
PGSC0003DMT400066559	Potato	cytosol	53.88	59.15
Solyc01g107740.2.1	Tomato	cytosol	53.1	57.56
CDX72452	Canola	cytosol	55.04	56.35
CDY49277	Canola	cytosol	55.81	54.75
Bra017628.1-P	Field mustard	cytosol	55.43	54.58
PGSC0003DMT400015906	Potato	cytosol	52.33	54.0
AT4G34150.1	Thale cress	cytosol	51.16	53.44
Solyc10g050060.1.1	Tomato	cytosol	51.55	53.2
Bra011500.1-P	Field mustard	cytosol	53.1	53.1
CDY57743	Canola	cytosol	48.84	52.72
CDX75404	Canola	cytosol, extracellular, nucleus	52.71	52.71
Bra034611.1-P	Field mustard	cytosol	48.84	52.28
GSMUA_Achr4P09410_001	Banana	cytosol	49.22	52.05
CDX76264	Canola	cytosol	48.45	51.87
VIT_18s0001g09970.t01	Wine grape	cytosol	55.43	47.99
TraesCSU01G173200.1	Wheat	cytosol	48.06	47.69
TraesCS7B01G441800.1	Wheat	cytosol	49.22	46.69
TraesCS7B01G441900.1	Wheat	cytosol	49.22	46.69
TraesCS7A01G524400.1	Wheat	cytosol	48.45	45.96
PGSC0003DMT400077661	Potato	cytosol	35.66	45.1
TraesCS7D01G513300.1	Wheat	cytosol	46.51	44.12
TraesCSU01G173100.1	Wheat	cytosol	47.67	43.62
HORVU7Hr1G116460.1	Barley	cytosol	46.51	43.01
HORVU7Hr1G116400.2	Barley	cytosol	46.51	43.01
GSMUA_Achr3P19730_001	Banana	mitochondrion	46.12	42.96
OQU76760	Sorghum	cytosol	46.12	42.81
CDY31792	Canola	cytosol	10.47	41.54
Zm00001d046625_P001	Maize	cytosol	47.29	41.22
CDY31791	Canola	extracellular, plasma membrane	9.69	30.86

Protein Annotations

EMBL:ACUP02006726	EnsemblPlants:KRH27566	EnsemblPlantsGene:GLYMA_11G000700	EntrezGene:100776879	Gene3D:2.60.40.150	InterPro:C2_dom
InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR10024	PANTHER:PTHR10024:SF345	PFAM:PF00168
PFscan:PS50004	ProteinID:KRH27566	ProteinID:KRH27566.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI000152B01A	UniProt:I1LFN5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:33497..35198

Molecular Weight (calculated)

27967.7 Da

IEP (calculated)

8.368

GRAVY (calculated)

-0.557

Length

258 amino acids

Sequence
(BLAST)

001: MSSITGIQGQ PLEVTVVSCS KLKDTEWISR QDPYVCVEYG STKFRTRTCT DGGKNPVFQE KFIFPLIEGL RELNVLVWNS NTLTFDDFIG SGKIQLHKVL
101: SQGFDDSAWP LQTKTGRYAG EVKVILHYAI ANQRHKLVSG HAPSAPPYVA TATPPVPSSY STSYPPPPSA TSYPPPPSPP SATPYHTTGS YSYPPPPPPP
201: TAYPPYSSHS SPYPPSSYPP QPSSYPPPPP PSSYPPASAY PYPPPAGYPS GIYPPPPY

Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)

001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY

Arabidopsis Description

AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.